RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 DUTP33316 252 aaKnown RBP9.37□□□□□ -0.91
TTC28-201ENST00000397906 SAA4P35542 130 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 GAGE10A6NGK3 116 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 MBNL3Q9NUK0 354 aaKnown RBP9.37□□□□□ -0.91
TTC28-201ENST00000397906 OTORQ9NRC9 128 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 TCF21O43680 179 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 TMEM8BA6NDV4 472 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 GATA4P43694 442 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 SLC25A34Q6PIV7 304 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 FNDC1Q4ZHG4 1894 aaPredicted RBP9.37□□□□□ -0.91
TTC28-201ENST00000397906 PRR31Q5SQ13 230 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 ZNF257Q9Y2Q1 563 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 ZNF324BQ6AW86 544 aaPredicted RBP9.37□□□□□ -0.91
TTC28-201ENST00000397906 A0A0A6YYD4 124 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 TMEM250H0YL14 139 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 RCHY1Q96PM5 261 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 TRAV12-3A0A0B4J271 114 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 A0A0U1RRA0 63 aa9.37□□□□□ -0.91
TTC28-201ENST00000397906 ZNF474Q6S9Z5 364 aaPredicted RBP9.37□□□□□ -0.91
TTC28-201ENST00000397906 FER1L5A0AVI2 2057 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 TRAV21A0A0B4J279 112 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 LAIR2Q6ISS4 152 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 TEX38Q6PEX7 206 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 TRAV5A0A0B4J249 113 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 PMCHL1Q16048 86 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 NUDT11Q96G61 164 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 IGFBP3P17936 291 aaPredicted RBP9.36□□□□□ -0.91
TTC28-201ENST00000397906 PRB1P04280 392 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 FAM110DQ8TAY7 271 aaPredicted RBP9.36□□□□□ -0.91
TTC28-201ENST00000397906 SPTA1P02549 2419 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 FABP5P3A8MUU1 101 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 COL5A1-AS1Q5SY13 56 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 TMEM183AQ8IXX5 376 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 CD28P10747 220 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
TTC28-201ENST00000397906 ADARB2-AS1A8MUL3 147 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 SRRM5B3KS81 715 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 KLHDC3Q9BQ90 382 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 PET117Q6UWS5 81 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 FAM19A2Q8N3H0 131 aa9.36□□□□□ -0.91
TTC28-201ENST00000397906 FCN3O75636 299 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 NUDT10Q8NFP7 164 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 CACNA1GO43497 2377 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 ZNF815PA8K554 130 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 NABP1Q96AH0 204 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 RPUSD1Q9UJJ7 312 aaKnown RBP9.35□□□□□ -0.91
TTC28-201ENST00000397906 TRGV11A0A075B6L2 103 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 RBMY1BA6NDE4 496 aaKnown RBP9.35□□□□□ -0.91
TTC28-201ENST00000397906 RBMY1EA6NEQ0 496 aaKnown RBP9.35□□□□□ -0.91
TTC28-201ENST00000397906 RBMY1DP0C7P1 496 aaKnown RBP9.35□□□□□ -0.91
TTC28-201ENST00000397906 RBMY1A1P0DJD3 496 aaKnown RBP9.35□□□□□ -0.91
TTC28-201ENST00000397906 RBMY1CP0DJD4 496 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 CACNA1EQ15878 2313 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 A0A087WX48 190 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 NPIPB5A8MRT5 1133 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 BUB1B-PAK6H3BSN5 160 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 TSPAN13O95857 204 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 SEPSECSQ9HD40 501 aaKnown RBP9.35□□□□□ -0.91
TTC28-201ENST00000397906 SLC25A16P16260 332 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 ERASQ7Z444 233 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 TMEM144Q7Z5S9 345 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 ST6GALNAC6Q969X2 333 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 PRADC1Q9BSG0 188 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 A0A1B0GV72 72 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 A6NNC1 897 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 SMIM6P0DI80 62 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 C18orf12Q96KH6 178 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 VCX2Q9H322 139 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 ERVH48-1M5A8F1 160 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 ATP5LO75964 103 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 ZNF506Q5JVG8 444 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 IGFL4Q6B9Z1 124 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 Q6ZS92 163 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 IL36BQ9NZH7 164 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 PSPNO60542 156 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 FAM89BQ8N5H3 189 aa9.35□□□□□ -0.91
TTC28-201ENST00000397906 IGKV1-27A0A075B6S5 117 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 MBD3L4A6NDZ8 208 aaPredicted RBP9.34□□□□□ -0.91
TTC28-201ENST00000397906 MBD3L3A6NE82 208 aaPredicted RBP9.34□□□□□ -0.91
TTC28-201ENST00000397906 MBD3L5A6NJ08 208 aaPredicted RBP9.34□□□□□ -0.91
TTC28-201ENST00000397906 MBD3L2Q8NHZ7 208 aaPredicted RBP9.34□□□□□ -0.91
TTC28-201ENST00000397906 TRBV9A0A0B4J1U6 114 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 PMS2P5A8MQ11 134 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.34□□□□□ -0.91
TTC28-201ENST00000397906 CRYGSP22914 178 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 F8VVB4 439 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 F8VWA3 439 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 LBHQ53QV2 105 aaPredicted RBP9.34□□□□□ -0.91
TTC28-201ENST00000397906 RNF114Q9Y508 228 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 PRCDQ00LT1 54 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 NPC2P61916 151 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 CLPSP04118 112 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 ORMDL3Q8N138 153 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 EXOC3-AS1Q8N2X6 119 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 SLC25A39Q9BZJ4 359 aaPredicted RBP9.34□□□□□ -0.91
TTC28-201ENST00000397906 C5orf24Q7Z6I8 188 aa9.34□□□□□ -0.91
TTC28-201ENST00000397906 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms