RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 IMMP2LQ96T52 175 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 ZNF430Q9H8G1 570 aaPredicted RBP15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 SIGLEC9Q9Y336 463 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 SVEP1Q4LDE5 3571 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 AKAP9Q99996 3911 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 PPP5D1E7EU14 171 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 HMGB3O15347 200 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 GGCTO75223 188 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 TYMSP04818 313 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 TMEM11P17152 192 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 COA6Q5JTJ3 125 aaKnown RBP15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 FBXL15Q9H469 300 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 TCF19Q9Y242 345 aa15.4■□□□□ 0.06
PDLIM2-204ENST00000397760 RRHO14718 337 aa15.39■□□□□ 0.05
PDLIM2-204ENST00000397760 NBR2O15453 112 aa15.39■□□□□ 0.05
PDLIM2-204ENST00000397760 Q8N6K4 173 aa15.39■□□□□ 0.05
PDLIM2-204ENST00000397760 NPBQ8NG41 125 aa15.39■□□□□ 0.05
PDLIM2-204ENST00000397760 OR4X1Q8NH49 305 aa15.39■□□□□ 0.05
PDLIM2-204ENST00000397760 NPVFQ9HCQ7 196 aa15.39■□□□□ 0.05
PDLIM2-204ENST00000397760 ZNF257Q9Y2Q1 563 aa15.39■□□□□ 0.05
PDLIM2-204ENST00000397760 CREBBPQ92793 2442 aa15.39■□□□□ 0.05
PDLIM2-204ENST00000397760 TEX50A0A1B0GTY4 177 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 CXorf1O96002 111 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 STAG3L2P0CL84 134 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 STAG3L3P0CL85 134 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 ATP5IP56385 69 aaPredicted RBP15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 PLGLAQ15195 96 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 MRGPRG-AS1Q2M3A8 158 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 KCNIP4Q6PIL6 250 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 ACY3Q96HD9 319 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 GGTLC1Q9BX51 225 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 COMMD5Q9GZQ3 224 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 LSM4Q9Y4Z0 139 aaKnown RBP15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 NDUFA3O95167 84 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 FSHBP01225 129 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 PRSS8Q16651 343 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 PPP1R27Q86WC6 154 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 TMEM183AQ8IXX5 376 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 MMD2Q8IY49 270 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 OR10D4PQ8NGN7 298 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 OR5B3Q8NH48 314 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 GATAD1Q8WUU5 269 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 HINT2Q9BX68 163 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 GPR61Q9BZJ8 451 aa15.38■□□□□ 0.05
PDLIM2-204ENST00000397760 PXMP4Q9Y6I8 212 aa15.37■□□□□ 0.05
PDLIM2-204ENST00000397760 NCBP2LA6PVI3 153 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 RAB31Q13636 194 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 LURAP1LQ8IV03 231 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 OR1L8Q8NGR8 309 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 MGST2Q99735 147 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 ITPR3Q14573 2671 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 ABCA1O95477 2261 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 HIST1H1BP16401 226 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 NPPCP23582 126 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 PRCDQ00LT1 54 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 LINC01551Q86U37 167 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 BCL6BQ8N143 479 aaPredicted RBP15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 RNASEH2CQ8TDP1 164 aaKnown RBP15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 TMEM170AQ8WVE7 144 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 PFDN5Q99471 154 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 ENY2Q9NPA8 101 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 ARL2-SNX15V9GYD0 113 aa15.36■□□□□ 0.05
PDLIM2-204ENST00000397760 FCN1O00602 326 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 CD5LO43866 347 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 ACTL6BO94805 426 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 RPL29P47914 159 aaKnown RBP15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 GNB1P62873 340 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 KRTAP1-1Q07627 177 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 TNXAQ16473 311 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 C5orf64Q2M2E5 130 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 SLC24A4Q8NFF2 622 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 PIFOQ8TCI5 191 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 C22orf15Q8WYQ4 148 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 NDUFA4L2Q9NRX3 87 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 ZANQ9Y493 2812 aa15.35■□□□□ 0.05
PDLIM2-204ENST00000397760 MT-CO2P00403 227 aa15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 NPY1RP25929 384 aa15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 C10orf55Q5SWW7 151 aa15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 GFI1BQ5VTD9 330 aa15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 TEPPQ6URK8 271 aa15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 PLEKHA3Q9HB20 300 aa15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 C1RLQ9NZP8 487 aa15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 ZNF469Q96JG9 3925 aaPredicted RBP15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 CELSR1Q9NYQ6 3014 aa15.34■□□□□ 0.05
PDLIM2-204ENST00000397760 E7EUB6 86 aa15.33■□□□□ 0.05
PDLIM2-204ENST00000397760 FOXL1Q12952 345 aa15.33■□□□□ 0.05
PDLIM2-204ENST00000397760 DEFB112Q30KQ8 113 aa15.33■□□□□ 0.05
PDLIM2-204ENST00000397760 ACTL10Q5JWF8 245 aa15.33■□□□□ 0.05
PDLIM2-204ENST00000397760 MDFIC2A0A1B0GVS7 189 aa15.33■□□□□ 0.04
PDLIM2-204ENST00000397760 CA2P00918 260 aa15.33■□□□□ 0.04
PDLIM2-204ENST00000397760 RHOBP62745 196 aa15.33■□□□□ 0.04
PDLIM2-204ENST00000397760 CST9LP1Q5W188 147 aa15.33■□□□□ 0.04
PDLIM2-204ENST00000397760 C9orf139Q6ZV77 190 aa15.33■□□□□ 0.04
PDLIM2-204ENST00000397760 OR1P1Q8NH06 330 aa15.33■□□□□ 0.04
PDLIM2-204ENST00000397760 HIST1H2BLQ99880 126 aa15.33■□□□□ 0.04
PDLIM2-204ENST00000397760 CGB1A6NKQ9 187 aa15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 GATCO43716 136 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 ARL14EPLP0DKL9 152 aa15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 FABP4P15090 132 aa15.32■□□□□ 0.04
PDLIM2-204ENST00000397760 RPL27AP46776 148 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms