RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 UBQLN2Q9UHD9 624 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 DNAH17Q9UFH2 4485 aa11.89□□□□□ -0.51
CUX2-202ENST00000397643 IGLV11-55A0A075B6I3 123 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 CEBPZOSA8MTT3 80 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 MPTX1A8MV57 137 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 FAM90A26D6RGX4 464 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 PITX3O75364 302 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 CTRB1P17538 263 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 PSMB6P28072 239 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 CTRB2Q6GPI1 263 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 RBPMS2Q6ZRY4 209 aaKnown RBP11.88□□□□□ -0.51
CUX2-202ENST00000397643 TMEM217Q8N7C4 229 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 ZBTB8BQ8NAP8 495 aaPredicted RBP11.88□□□□□ -0.51
CUX2-202ENST00000397643 OR10C1Q96KK4 312 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 SPAG8Q99932 426 aaPredicted RBP11.88□□□□□ -0.51
CUX2-202ENST00000397643 MGAT4CQ9UBM8 478 aa11.88□□□□□ -0.51
CUX2-202ENST00000397643 CGB1A6NKQ9 187 aa11.87□□□□□ -0.51
CUX2-202ENST00000397643 MED6O75586 246 aa11.87□□□□□ -0.51
CUX2-202ENST00000397643 NXPH3O95157 252 aa11.87□□□□□ -0.51
CUX2-202ENST00000397643 HOXA1P49639 335 aaPredicted RBP11.87□□□□□ -0.51
CUX2-202ENST00000397643 ERHP84090 104 aaKnown RBP11.87□□□□□ -0.51
CUX2-202ENST00000397643 OR10W1Q8NGF6 305 aa11.87□□□□□ -0.51
CUX2-202ENST00000397643 MRPL27Q9P0M9 148 aaKnown RBP11.87□□□□□ -0.51
CUX2-202ENST00000397643 HSPB7Q9UBY9 170 aa11.87□□□□□ -0.51
CUX2-202ENST00000397643 DNAH11Q96DT5 4516 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 DYNC1H1Q14204 4646 aaKnown RBP11.86□□□□□ -0.51
CUX2-202ENST00000397643 IGLC7A0M8Q6 106 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 TSPAN4O14817 238 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 SIX6O95475 246 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 CLEC3BP05452 202 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 OR13C7P0DN81 318 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 FCGR2BP31994 310 aaPredicted RBP11.86□□□□□ -0.51
CUX2-202ENST00000397643 NKX2-1P43699 371 aaPredicted RBP11.86□□□□□ -0.51
CUX2-202ENST00000397643 ELLP55199 621 aaPredicted RBP11.86□□□□□ -0.51
CUX2-202ENST00000397643 CYCSP99999 105 aaKnown RBP11.86□□□□□ -0.51
CUX2-202ENST00000397643 SPINK9Q5DT21 86 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 Q6ZNX1 250 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 STPG3Q8N7X2 389 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 OR4D5Q8NGN0 318 aa11.86□□□□□ -0.51
CUX2-202ENST00000397643 TRBV7-1A0A0A6YYK4 115 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 IGHV3-35A0A0C4DH35 117 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 INS-IGF2F8WCM5 200 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 WRBO00258 174 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 SCGB1D2O95969 90 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 REG1AP05451 166 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 RPL35AP18077 110 aaKnown RBP11.85□□□□□ -0.51
CUX2-202ENST00000397643 GPR183P32249 361 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 RRAS2P62070 204 aaPredicted RBP11.85□□□□□ -0.51
CUX2-202ENST00000397643 ID3Q02535 119 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 FCN2Q15485 313 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 ZNF502Q8TBZ5 544 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 DTD1Q8TEA8 209 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 TMEM190Q8WZ59 177 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 ZNF436Q9C0F3 470 aaPredicted RBP11.85□□□□□ -0.51
CUX2-202ENST00000397643 RBKSQ9H477 322 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 MAP6D1Q9H9H5 199 aa11.85□□□□□ -0.51
CUX2-202ENST00000397643 HEYLQ9NQ87 328 aaPredicted RBP11.85□□□□□ -0.51
CUX2-202ENST00000397643 CYB5BO43169 146 aa11.84□□□□□ -0.51
CUX2-202ENST00000397643 DEFA4P12838 97 aa11.84□□□□□ -0.51
CUX2-202ENST00000397643 HIST1H1BP16401 226 aaKnown RBP11.84□□□□□ -0.51
CUX2-202ENST00000397643 SNCAP37840 140 aa11.84□□□□□ -0.51
CUX2-202ENST00000397643 NANOS2P60321 138 aaKnown RBP11.84□□□□□ -0.51
CUX2-202ENST00000397643 WT1-ASQ06250 92 aa11.84□□□□□ -0.51
CUX2-202ENST00000397643 CIB3Q96Q77 187 aaPredicted RBP11.84□□□□□ -0.51
CUX2-202ENST00000397643 UFC1Q9Y3C8 167 aa11.84□□□□□ -0.51
CUX2-202ENST00000397643 SYNGR2O43760 224 aa11.83□□□□□ -0.52
CUX2-202ENST00000397643 SUB1P53999 127 aaKnown RBP eCLIP11.83□□□□□ -0.52
CUX2-202ENST00000397643 CXorf58Q96LI9 332 aa11.83□□□□□ -0.52
CUX2-202ENST00000397643 NMES1Q9C002 83 aa11.83□□□□□ -0.52
CUX2-202ENST00000397643 MAGT1Q9H0U3 335 aa11.83□□□□□ -0.52
CUX2-202ENST00000397643 ABCA13Q86UQ4 5058 aa11.83□□□□□ -0.52
CUX2-202ENST00000397643 MBPP02686 304 aaPredicted RBP11.82□□□□□ -0.52
CUX2-202ENST00000397643 IAPPP10997 89 aa11.82□□□□□ -0.52
CUX2-202ENST00000397643 HTR2BP41595 481 aa11.82□□□□□ -0.52
CUX2-202ENST00000397643 H2BFSP57053 126 aa11.82□□□□□ -0.52
CUX2-202ENST00000397643 POLR2GP62487 172 aaKnown RBP eCLIP11.82□□□□□ -0.52
CUX2-202ENST00000397643 OR11H7Q8NGC8 314 aa11.82□□□□□ -0.52
CUX2-202ENST00000397643 C11orf68Q9H3H3 251 aaKnown RBP11.82□□□□□ -0.52
CUX2-202ENST00000397643 F11RQ9Y624 299 aaKnown RBP11.82□□□□□ -0.52
CUX2-202ENST00000397643 CXCL3P19876 107 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 S100A10P60903 97 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 RPP30P78346 268 aaKnown RBP11.81□□□□□ -0.52
CUX2-202ENST00000397643 IL15RAQ13261 267 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 NOXA1Q86UR1 476 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 OR1P1Q8NH06 330 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 ASB13Q8WXK3 278 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 RAB40CQ96S21 281 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 DAZ1Q9NQZ3 744 aaKnown RBP11.81□□□□□ -0.52
CUX2-202ENST00000397643 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
CUX2-202ENST00000397643 U3KQ87 197 aa11.81□□□□□ -0.52
CUX2-202ENST00000397643 A0A1B0GVY2 172 aa11.8□□□□□ -0.52
CUX2-202ENST00000397643 K7EPK0 472 aa11.8□□□□□ -0.52
CUX2-202ENST00000397643 L7N2F9 121 aa11.8□□□□□ -0.52
CUX2-202ENST00000397643 TGOLN2O43493 480 aa11.8□□□□□ -0.52
CUX2-202ENST00000397643 SSSCA1O60232 199 aa11.8□□□□□ -0.52
CUX2-202ENST00000397643 IFNA10P01566 189 aa11.8□□□□□ -0.52
CUX2-202ENST00000397643 RLN2P04090 185 aa11.8□□□□□ -0.52
CUX2-202ENST00000397643 PVALBP20472 110 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms