RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 IGHV3OR16-8A0A075B7F1 116 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 CENPVL3A0A0U1RRI6 287 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 FNDC10F2Z333 226 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 NDUFB4O95168 129 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 IGKV1-39P01597 117 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 IGKV1D-39P04432 117 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 AMY1AP04745 511 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 LMO4P61968 165 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 C11orf44Q8N8P7 122 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 EXPH5Q8NEV8 1989 aa6.66□□□□□ -1.34
PTPRD-204ENST00000397606 HIVEP3Q5T1R4 2406 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 C15orf62A8K5M9 175 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 DEFB112Q30KQ8 113 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF329Q86UD4 541 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 CYB561D1Q8N8Q1 229 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 TRGV9Q99603 122 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 TXN2Q99757 166 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 SAV1Q9H4B6 383 aaPredicted RBP6.65□□□□□ -1.34
PTPRD-204ENST00000397606 J3KRW8 73 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 HLA-DRB1P01911 266 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 USF2Q15853 346 aaPredicted RBP6.65□□□□□ -1.34
PTPRD-204ENST00000397606 BAGE3Q86Y29 109 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 GBGT1Q8N5D6 347 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 ZNF439Q8NDP4 499 aa6.65□□□□□ -1.34
PTPRD-204ENST00000397606 H3BQ15 152 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 TSPOP30536 169 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 OR4B1Q8NGF8 309 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 BSCL2Q96G97 398 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-204ENST00000397606 TBX15Q96SF7 602 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 IGHV3-66A0A0C4DH42 116 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 G3V3Q6 166 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 H3BTX0 84 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 C5orf17Q8NAS9 161 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 HIST1H2BAQ96A08 127 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 RAX2Q96IS3 184 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 GGTLC1Q9BX51 225 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 VPREB3Q9UKI3 123 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 DOPEY2Q9Y3R5 2298 aa6.65□□□□□ -1.35
PTPRD-204ENST00000397606 DYSFO75923 2080 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 ZNF462Q96JM2 2506 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 A0A087X0M5 115 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 A0A1B0GX30 115 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 EIF3GO75821 320 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTPRD-204ENST00000397606 LYL1P12980 280 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 A8MXK9 166 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 TMEM250H0YL14 139 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 IGLV1-47P01700 117 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 PAX1P15863 534 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 FABP9Q0Z7S8 132 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 MIR17HGQ75NE6 70 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 HOXA3O43365 443 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-204ENST00000397606 IGHV4-38-2P0DP08 117 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 ICAM4Q14773 271 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 TMEM88Q6PEY1 159 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 CRIP3Q6Q6R5 217 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 IL17RELQ6ZVW7 336 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 PIP4P2Q8N4L2 257 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 SIGLECL1Q8N7X8 197 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 SGMS2Q8NHU3 365 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 VN1R17PQ8TDU5 208 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 BBC3Q96PG8 261 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-204ENST00000397606 RNF114Q9Y508 228 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 TCF21O43680 179 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 PSG1P11464 419 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 CRYBB3P26998 211 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 S100A12P80511 92 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 Q71RC1 249 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-204ENST00000397606 CLRN3Q8NCR9 226 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 SIRPDQ9H106 197 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 WFDC1Q9HC57 220 aa6.64□□□□□ -1.35
PTPRD-204ENST00000397606 FCN1O00602 326 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 HTN1P15515 57 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 AWAT1Q58HT5 328 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 FAM162BQ5T6X4 162 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 PUSL1Q8N0Z8 303 aaKnown RBP6.63□□□□□ -1.35
PTPRD-204ENST00000397606 SLC50A1Q9BRV3 221 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 CGB1A6NKQ9 187 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 SRRM4A7MD48 611 aaKnown RBP6.63□□□□□ -1.35
PTPRD-204ENST00000397606 CD5P06127 495 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 NSUN5P1Q3KNT7 163 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 SAPCD1Q5SSQ6 148 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 ZNF841Q6ZN19 808 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 GOLT1AQ6ZVE7 132 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 Q8N7P7 452 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 FAM74A7A6NL05 159 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 IGHV4-59P01825 116 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 NUTF2P61970 127 aaKnown RBP6.63□□□□□ -1.35
PTPRD-204ENST00000397606 IFITM2Q01629 132 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 COX19Q49B96 90 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 LY6G5BQ8NDX9 201 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 LINC00574Q9H8X3 128 aa6.63□□□□□ -1.35
PTPRD-204ENST00000397606 NPIPB5A8MRT5 1133 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 FAM120AOSQ5T036 256 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 TMPRSS5Q9H3S3 457 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 PEF1Q9UBV8 284 aaKnown RBP6.62□□□□□ -1.35
PTPRD-204ENST00000397606 CGB3P0DN86 165 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 CGB7P0DN87 165 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 HIST1H1AQ02539 215 aaPredicted RBP6.62□□□□□ -1.35
PTPRD-204ENST00000397606 ZNF506Q5JVG8 444 aa6.62□□□□□ -1.35
PTPRD-204ENST00000397606 KLHL30-AS1Q8NEE0 82 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms