RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 HEYLQ9NQ87 328 aaPredicted RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 MBNL3Q9NUK0 354 aaKnown RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 THYN1Q9P016 225 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 TET2Q6N021 2002 aaPredicted RBP4.13□□□□□ -1.75
SSR1-202ENST00000397511 CELSR1Q9NYQ6 3014 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 ABCA4P78363 2273 aa4.13□□□□□ -1.75
SSR1-202ENST00000397511 DSCAMO60469 2012 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 OOEPA6NGQ2 149 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 C2orf70A6NJV1 201 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 C9JCJ5 164 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 FAM90A26D6RGX4 464 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 J3QR89 54 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 K7EN84 100 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 PROP1O75360 226 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 ACTL6BO94805 426 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 APOA2P02652 100 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 HTR1DP28221 377 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 REG1BP48304 166 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 CATR1Q13166 79 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 SRSF7Q16629 238 aaKnown RBP eCLIP4.12□□□□□ -1.752e-7■□□□□ 10.5
SSR1-202ENST00000397511 TCTEX1D4Q5JR98 221 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 PRAMEF5Q5TYX0 476 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 RNASEKQ6P5S7 137 aaKnown RBP4.12□□□□□ -1.75
SSR1-202ENST00000397511 ZNF841Q6ZN19 808 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 Q6ZT83 130 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 Q8IYB0 196 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 C18orf32Q8TCD1 76 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 RAB1CQ92928 201 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 ZC2HC1AQ96GY0 325 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 OR2V2Q96R30 315 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 PMCHL2Q9BQD1 86 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 NPFFR1Q9GZQ6 430 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 ZNF331Q9NQX6 463 aaPredicted RBP4.12□□□□□ -1.75
SSR1-202ENST00000397511 TP73-AS1Q9UF72 201 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 V9GYV3 84 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 MED13LQ71F56 2210 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 ZNF318Q5VUA4 2279 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 A0A087X0K7 114 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.12□□□□□ -1.75
SSR1-202ENST00000397511 IQCF6A8MYZ5 107 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 H3BRM9 83 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 RRHO14718 337 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 ZNF207O43670 478 aaKnown RBP4.12□□□□□ -1.75
SSR1-202ENST00000397511 CGAP01215 116 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 PRDX2P32119 198 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 PRB3Q04118 309 aaPredicted RBP4.12□□□□□ -1.75
SSR1-202ENST00000397511 FAM162BQ5T6X4 162 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 C1orf229Q6ZS94 237 aaPredicted RBP4.12□□□□□ -1.75
SSR1-202ENST00000397511 SAP30LQ9HAJ7 183 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 TRBV6-6A0A0A6YYG2 114 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 IGHV1-18A0A0C4DH31 117 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 hDV102S1A0JD36 115 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 PSMB11A5LHX3 300 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 GAGE12HA6NDE8 117 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 H3BUT2 72 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 K7EQM0 130 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 IGHV3-48P01763 117 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 FTH1P19P0C7X4 201 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 HIST1H1EP10412 219 aaKnown RBP4.12□□□□□ -1.75
SSR1-202ENST00000397511 CD300EQ496F6 205 aaPredicted RBP4.12□□□□□ -1.75
SSR1-202ENST00000397511 MIC13Q5XKP0 118 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 C22orf34Q6ZV56 151 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 MOB1BQ7L9L4 216 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 MOB3BQ86TA1 216 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 BPIFA4PQ86YQ2 179 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 WDR31Q8NA23 367 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 OR10AG1Q8NH19 301 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 OR4A16Q8NH70 328 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 MS4A6AQ9H2W1 248 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 SCRT2Q9NQ03 307 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 C1RLQ9NZP8 487 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 NAV3Q8IVL0 2385 aa4.12□□□□□ -1.75
SSR1-202ENST00000397511 TLN1Q9Y490 2541 aaKnown RBP4.11□□□□□ -1.75
SSR1-202ENST00000397511 IGKV1D-17A0A075B6S4 117 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.11□□□□□ -1.75
SSR1-202ENST00000397511 A0A0G2JLM5 398 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 SPINT2O43291 252 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 CLDN14O95500 239 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 CXorf1O96002 111 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 CD1BP29016 333 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 SLC35B1P78383 322 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 SLAQ13239 276 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 RAB31Q13636 194 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 C5orf64Q2M2E5 130 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 ZNF718Q3SXZ3 478 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 TMEM97Q5BJF2 176 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 PRR31Q5SQ13 230 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 FA2HQ7L5A8 372 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 OR4A5Q8NH83 315 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 OR2T6Q8NHC8 308 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 VSTM2AQ8TAG5 236 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 RND1Q92730 232 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 MRAP2Q96G30 205 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 TAAR6Q96RI8 345 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 CLCF1Q9UBD9 225 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 AKAP6Q13023 2319 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 ATRXP46100 2492 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 TRGV10A0A0A0MS01 117 aa4.11□□□□□ -1.75
SSR1-202ENST00000397511 IGKV3-15P01624 115 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms