RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 HPGDSO60760 199 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 SCGB2A1O75556 95 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 CDS2O95674 445 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 HNRNPCP07910 306 aaKnown RBP eCLIP8.54□□□□□ -1.04
SYNE4-203ENST00000397428 AKR1C2P52895 323 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 NUTF2P61970 127 aaKnown RBP8.54□□□□□ -1.04
SYNE4-203ENST00000397428 DHODHQ02127 395 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 C2orf83Q53S99 150 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 PSMG4Q5JS54 123 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 ZNF705AQ6ZN79 300 aaPredicted RBP8.54□□□□□ -1.04
SYNE4-203ENST00000397428 OR1S2Q8NGQ3 325 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 ZFAND1Q8TCF1 268 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 RRNAD1Q96FB5 475 aaKnown RBP8.54□□□□□ -1.04
SYNE4-203ENST00000397428 ENY2Q9NPA8 101 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 XCL2Q9UBD3 114 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 MTFP1Q9UDX5 166 aa8.54□□□□□ -1.04
SYNE4-203ENST00000397428 DNAH17Q9UFH2 4485 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 RPS10-NUDT3A0A1W2PQS6 291 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 SMIM9A6NGZ8 99 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 ZNF705FA8MVS1 300 aaPredicted RBP8.53□□□□□ -1.04
SYNE4-203ENST00000397428 M0R2N4 97 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 B3GALNT1O75752 331 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 CD74P04233 296 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 CD3DP04234 171 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 ZNF705DP0CH99 300 aaPredicted RBP8.53□□□□□ -1.04
SYNE4-203ENST00000397428 ZNF705BP0CI00 300 aaPredicted RBP8.53□□□□□ -1.04
SYNE4-203ENST00000397428 SLC25A4P12235 298 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 TBPP20226 339 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 OR10J1P30954 320 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 HOXA1P49639 335 aaPredicted RBP8.53□□□□□ -1.04
SYNE4-203ENST00000397428 SNRPD3P62318 126 aaKnown RBP8.53□□□□□ -1.04
SYNE4-203ENST00000397428 USF2Q15853 346 aaPredicted RBP8.53□□□□□ -1.04
SYNE4-203ENST00000397428 RNASE10Q5GAN6 216 aaKnown RBP8.53□□□□□ -1.04
SYNE4-203ENST00000397428 FAM219AQ8IW50 185 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 RNASEH2CQ8TDP1 164 aaKnown RBP8.53□□□□□ -1.04
SYNE4-203ENST00000397428 FAM210BQ96KR6 192 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 CLUHP3Q96NS8 147 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 NRN1Q9NPD7 142 aa8.53□□□□□ -1.04
SYNE4-203ENST00000397428 NXPH3O95157 252 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 SPART-AS1P0CW21 52 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 RND2P52198 227 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 TRIM16LQ309B1 348 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 Q6ZR54 194 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 CCDC71LQ8N9Z2 235 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 OR4D10Q8NGI6 311 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 OR13C8Q8NGS7 320 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 OR52I2Q8NH67 350 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 GLYATL2Q8WU03 294 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 TMEM170AQ8WVE7 144 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 TMEM222Q9H0R3 208 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 HEYLQ9NQ87 328 aaPredicted RBP8.52□□□□□ -1.05
SYNE4-203ENST00000397428 COPZ2Q9P299 210 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 PKD1P98161 4303 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 FAT2Q9NYQ8 4349 aa8.52□□□□□ -1.05
SYNE4-203ENST00000397428 TEX13DA0A0J9YY54 714 aaPredicted RBP8.51□□□□□ -1.05
SYNE4-203ENST00000397428 TMEM189A5PLL7 270 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 TOMM40O96008 361 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 RD3LP0DJH9 198 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 HLA-DRB4P13762 266 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
SYNE4-203ENST00000397428 NCS1P62166 190 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 SELENOHQ8IZQ5 122 aaKnown RBP8.51□□□□□ -1.05
SYNE4-203ENST00000397428 TMEM229BQ8NBD8 167 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 LHFPL5Q8TAF8 219 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 NPIPB3Q92617 1050 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 GPR146Q96CH1 333 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 ABHD1Q96SE0 405 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 RTBDNQ9BSG5 229 aaPredicted RBP8.51□□□□□ -1.05
SYNE4-203ENST00000397428 FUNDC2Q9BWH2 189 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 HLA-DRB4X5D2U9 266 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 RYR1P21817 5038 aa8.51□□□□□ -1.05
SYNE4-203ENST00000397428 A0A087WXM4 84 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 IFNA10P01566 189 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 IFNA21P01568 189 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 IL4P05112 153 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 RORCP51449 518 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 VBP1P61758 197 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 RNF212Q495C1 297 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 ETFRF1Q6IPR1 90 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 SIGLEC15Q6ZMC9 328 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 MARCH1Q8TCQ1 289 aa8.5□□□□□ -1.05
SYNE4-203ENST00000397428 DNAH2Q9P225 4427 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 OR5AC1P0C628 307 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 PSG1P11464 419 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 OXA1LQ15070 435 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 RNASE12Q5GAN4 147 aaKnown RBP8.49□□□□□ -1.05
SYNE4-203ENST00000397428 NMSQ5H8A3 153 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 GDF5OSQ5U4N7 250 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 MZT2AQ6P582 158 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 NOXA1Q86UR1 476 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 SLC24A4Q8NFF2 622 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 RNASE11Q8TAA1 199 aaKnown RBP8.49□□□□□ -1.05
SYNE4-203ENST00000397428 RBPMSQ93062 196 aaKnown RBP8.49□□□□□ -1.05
SYNE4-203ENST00000397428 KRTAP4-5Q9BYR2 181 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 SAV1Q9H4B6 383 aaPredicted RBP8.49□□□□□ -1.05
SYNE4-203ENST00000397428 VCX3AQ9NNX9 186 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 PLA2G2EQ9NZK7 142 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 DKK2Q9UBU2 259 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 CACFD1Q9UGQ2 172 aa8.49□□□□□ -1.05
SYNE4-203ENST00000397428 PKHD1P08F94 4074 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms