RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SEC11BP0C7V7 166 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 RND2P52198 227 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 RHOGP84095 191 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 ACSM6Q6P461 480 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 NECAP1Q8NC96 275 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 OR2G3Q8NGZ4 309 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 MS4A10Q96PG2 267 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 RSG1Q9BU20 258 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 NPCDR1Q9BY65 106 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 SH3BGRL3Q9H299 93 aa10.31□□□□□ -0.76
SEC13-209ENST00000397117 H3BUA1 57 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 K7EIM0 57 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 SOX15O60248 233 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 NMBP08949 121 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 SPP1P10451 314 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 CAMLGP49069 296 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 TOR2AQ5JU69 321 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 REC114Q7Z4M0 266 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 COMMD7Q86VX2 200 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 Q8N2B8 174 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 LSM4Q9Y4Z0 139 aaKnown RBP10.3□□□□□ -0.76
SEC13-209ENST00000397117 TIMM9Q9Y5J7 89 aa10.3□□□□□ -0.76
SEC13-209ENST00000397117 TRBV9A0A0B4J1U6 114 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 ZFP92A6NM28 416 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 NDUFB8O95169 186 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 TRGV3P03979 118 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 PPIFP30405 207 aaKnown RBP10.29□□□□□ -0.76
SEC13-209ENST00000397117 SLC35B1P78383 322 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 KLK9Q2XQG4 91 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 C15orf32Q32M92 178 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 FAM74A1Q5RGS3 127 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 TMEM116Q8NCL8 245 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 MGST2Q99735 147 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 PSMG3Q9BT73 122 aaPredicted RBP10.29□□□□□ -0.76
SEC13-209ENST00000397117 KCNIP2Q9NS61 270 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 KLK9Q9UKQ9 250 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 FAM223BA6NKX1 122 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 PF4V1P10720 104 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 NPBWR1P48145 328 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 MFAP4P55083 255 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 TPPP2P59282 170 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 DEFA5Q01523 94 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 ATP5G2Q06055 141 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 FAM223AQ8IWN6 122 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 CCDC28AQ8IWP9 274 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 OR4X1Q8NH49 305 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 VN1R17PQ8TDU5 208 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 PCNPQ8WW12 178 aaKnown RBP10.29□□□□□ -0.76
SEC13-209ENST00000397117 CXorf58Q96LI9 332 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 C21orf62Q9NYP8 219 aa10.29□□□□□ -0.76
SEC13-209ENST00000397117 MRPL36Q9P0J6 103 aaKnown RBP10.29□□□□□ -0.76
SEC13-209ENST00000397117 KMT2CQ8NEZ4 4911 aaKnown RBP10.28□□□□□ -0.76
SEC13-209ENST00000397117 PSMB11A5LHX3 300 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 MFSD2BA6NFX1 497 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 AGPAT2O15120 278 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 SCGB2A1O75556 95 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 BRI3O95415 125 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 IGLV1-40P01703 118 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 OR10J1P30954 320 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 SERF2P84101 59 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 CFHR3Q02985 330 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 Q56UQ5 140 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 AKR1C8PQ5T2L2 129 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 TMEM182Q6ZP80 229 aaPredicted RBP10.28□□□□□ -0.76
SEC13-209ENST00000397117 ZNF329Q86UD4 541 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 THAP8Q8NA92 274 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 EEF1AKMT3Q96AZ1 226 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 RFNGQ9Y644 331 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 S4R3C0 116 aa10.28□□□□□ -0.76
SEC13-209ENST00000397117 IGKV1OR2-108A0A075B7D4 117 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 UMAD1C9J7I0 102 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 GNG7O60262 68 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 CLN5O75503 358 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 IGHG4P01861 327 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 ELLP55199 621 aaPredicted RBP10.27□□□□□ -0.77
SEC13-209ENST00000397117 TEX38Q6PEX7 206 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 CENPVQ7Z7K6 275 aaPredicted RBP10.27□□□□□ -0.77
SEC13-209ENST00000397117 MRAPQ8TCY5 172 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 RNF141Q8WVD5 230 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 USMG5Q96IX5 58 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 TXN2Q99757 166 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 GGTLC1Q9BX51 225 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 PLA2G2EQ9NZK7 142 aa10.27□□□□□ -0.77
SEC13-209ENST00000397117 TRAV30A0A087WSZ9 112 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 TCRBV4S1A1TA0A5B7 111 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 IGHV3-23P01764 117 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 MBP02144 154 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 RPL29P47914 159 aaKnown RBP10.26□□□□□ -0.77
SEC13-209ENST00000397117 RAB5CP51148 216 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 SELENOTP62341 195 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 FFAR4Q5NUL3 377 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 CYP2G1PQ6ZSU1 146 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 LRRC20Q8TCA0 184 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 TRGV9Q99603 122 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 GAR1Q9NY12 217 aaKnown RBP10.26□□□□□ -0.77
SEC13-209ENST00000397117 PXMP4Q9Y6I8 212 aa10.26□□□□□ -0.77
SEC13-209ENST00000397117 TRBV7-1A0A0A6YYK4 115 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 A0A0G2JLM5 398 aa10.25□□□□□ -0.77
SEC13-209ENST00000397117 ZNF705EA8MWA4 302 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms