RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 CORTO00230 105 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 BCL2L11O43521 198 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 REG1AP05451 166 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 RNASE2P10153 161 aaKnown RBP7.91□□□□□ -1.14
NEDD8-202ENST00000396828 AREGP15514 252 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 CRIP2P52943 208 aaPredicted RBP7.91□□□□□ -1.14
NEDD8-202ENST00000396828 ATP6V1FQ16864 119 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 BSXQ3C1V8 233 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 AKIRIN2Q53H80 203 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 LAMTOR1Q6IAA8 161 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 OR8G2PQ6IF36 304 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 ACSM6Q6P461 480 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 UNQ5815/PRO19632Q6UWF5 114 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 LILRB2Q8N423 598 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 TTC9CQ8N5M4 171 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 TMEM217Q8N7C4 229 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 LFNGQ8NES3 379 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 OR5C1Q8NGR4 320 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 OR1P1Q8NH06 330 aa7.91□□□□□ -1.14
NEDD8-202ENST00000396828 RNASEH2CQ8TDP1 164 aaKnown RBP7.91□□□□□ -1.14
NEDD8-202ENST00000396828 PLECQ15149 4684 aaKnown RBP7.91□□□□□ -1.14
NEDD8-202ENST00000396828 BORCS7-ASMTA0A0B4J1R7 106 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 DFFBO76075 338 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 CRYGCP07315 174 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 LGALS1P09382 135 aaKnown RBP7.9□□□□□ -1.14
NEDD8-202ENST00000396828 CTRB1P17538 263 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 EIF5AP63241 154 aaKnown RBP7.9□□□□□ -1.14
NEDD8-202ENST00000396828 SLC38A11Q08AI6 406 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 OPCMLQ14982 345 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 CTRB2Q6GPI1 263 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 ETFRF1Q6IPR1 90 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 Q8N1Y9 231 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 GGACTQ9BVM4 153 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 SMIM3Q9BZL3 60 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 THYN1Q9P016 225 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 FBXL17Q9UF56 701 aa7.9□□□□□ -1.14
NEDD8-202ENST00000396828 F11RQ9Y624 299 aaKnown RBP7.9□□□□□ -1.14
NEDD8-202ENST00000396828 RPS10-NUDT3A0A1W2PQS6 291 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 PMS2P5A8MQ11 134 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 JTBO76095 146 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 IFNA5P01569 189 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 HIST1H1BP16401 226 aaKnown RBP7.89□□□□□ -1.15
NEDD8-202ENST00000396828 OPRK1P41145 380 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 EXOSC2Q13868 293 aaKnown RBP7.89□□□□□ -1.15
NEDD8-202ENST00000396828 ZNF266Q14584 549 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 CLINT1Q14677 625 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 SLC25A24Q6NUK1 477 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 MISP3Q96FF7 219 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 ATP5SQ99766 215 aa7.89□□□□□ -1.15
NEDD8-202ENST00000396828 ZNF471Q9BX82 626 aaPredicted RBP7.89□□□□□ -1.15
NEDD8-202ENST00000396828 FNDC10F2Z333 226 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 HSPB1P04792 205 aaKnown RBP7.88□□□□□ -1.15
NEDD8-202ENST00000396828 GPX4P36969 197 aaPredicted RBP7.88□□□□□ -1.15
NEDD8-202ENST00000396828 TPPP2P59282 170 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 DLK1P80370 383 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 DEFA5Q01523 94 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 ARL16Q0P5N6 197 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 PVRIGQ6DKI7 326 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 ZFAND6Q6FIF0 208 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 SLC51BQ86UW2 128 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 OR5T1Q8NG75 326 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 SCGB1C1Q8TD33 95 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 TMEM170AQ8WVE7 144 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 CACNG8Q8WXS5 425 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 TMEM147Q9BVK8 224 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 ZNF355PQ9NSJ1 428 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 UQCC1Q9NVA1 299 aa7.88□□□□□ -1.15
NEDD8-202ENST00000396828 SMCO3A2RU48 225 aa7.87□□□□□ -1.15
NEDD8-202ENST00000396828 PRSS46E5RG02 174 aa7.87□□□□□ -1.15
NEDD8-202ENST00000396828 IGLV1-51P01701 117 aa7.87□□□□□ -1.15
NEDD8-202ENST00000396828 TRGV3P03979 118 aa7.87□□□□□ -1.15
NEDD8-202ENST00000396828 IGHV4-30-4P0DP06 118 aa7.87□□□□□ -1.15
NEDD8-202ENST00000396828 TPT1P13693 172 aaKnown RBP7.87□□□□□ -1.15
NEDD8-202ENST00000396828 SLC16A13Q7RTY0 426 aa7.87□□□□□ -1.15
NEDD8-202ENST00000396828 BSCL2Q96G97 398 aaPredicted RBP7.87□□□□□ -1.15
NEDD8-202ENST00000396828 SLC35E1Q96K37 410 aa7.87□□□□□ -1.15
NEDD8-202ENST00000396828 TM2D3Q9BRN9 247 aa7.87□□□□□ -1.15
NEDD8-202ENST00000396828 IGLV11-55A0A075B6I3 123 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 UBE2L5PA0A1B0GUS4 154 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 H3BUA1 57 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 PRH1P02810 166 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 MFAP2P55001 183 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 AKR1C1Q04828 323 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 RAB31Q13636 194 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 VWC2Q2TAL6 325 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 RPL7L1Q6DKI1 246 aaKnown RBP7.86□□□□□ -1.15
NEDD8-202ENST00000396828 EIF5AL1Q6IS14 154 aaKnown RBP7.86□□□□□ -1.15
NEDD8-202ENST00000396828 IL34Q6ZMJ4 242 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 UBAC2Q8NBM4 344 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 CITED4Q96RK1 184 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 SLA2Q9H6Q3 261 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 EDA2RQ9HAV5 297 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 WFDC1Q9HC57 220 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 NPVFQ9HCQ7 196 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 CYTL1Q9NRR1 136 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 C19orf73Q9NVV2 129 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 TNCP24821 2201 aa7.86□□□□□ -1.15
NEDD8-202ENST00000396828 ALMS1Q8TCU4 4167 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 ANKRD34BA5PLL1 514 aa7.85□□□□□ -1.15
NEDD8-202ENST00000396828 FAM223BA6NKX1 122 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms