RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 PEX11BO96011 259 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 ZP4Q12836 540 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 CLEC19AQ6UXS0 136 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 GTSCR1Q86UQ5 136 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 IFITM2Q01629 132 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 PLAC1Q9HBJ0 212 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 PILRBQ9UKJ0 227 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 TRACP01848 142 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 ADAMTSL5Q6ZMM2 481 aa8.72□□□□□ -1.01
COL4A4-201ENST00000396625 GAGE12BA1L429 117 aa8.71□□□□□ -1.01
COL4A4-201ENST00000396625 GP6Q9HCN6 339 aa8.71□□□□□ -1.01
COL4A4-201ENST00000396625 PEMTQ9UBM1 199 aa8.71□□□□□ -1.01
COL4A4-201ENST00000396625 KIF26AQ9ULI4 1882 aaPredicted RBP8.71□□□□□ -1.01
COL4A4-201ENST00000396625 COL9A1P20849 921 aa8.71□□□□□ -1.01
COL4A4-201ENST00000396625 MIR17HGQ75NE6 70 aa8.71□□□□□ -1.01
COL4A4-201ENST00000396625 SMPXQ9UHP9 88 aa8.71□□□□□ -1.01
COL4A4-201ENST00000396625 IGFBP6P24592 240 aaPredicted RBP8.71□□□□□ -1.01
COL4A4-201ENST00000396625 PDLIM4P50479 330 aa8.71□□□□□ -1.01
COL4A4-201ENST00000396625 C8orf82Q6P1X6 216 aaPredicted RBP8.71□□□□□ -1.01
COL4A4-201ENST00000396625 PLA2G2FQ9BZM2 168 aa8.71□□□□□ -1.01
COL4A4-201ENST00000396625 UBE2DNLQ8IWF7 75 aa8.71□□□□□ -1.02
COL4A4-201ENST00000396625 NRTNQ99748 197 aa8.71□□□□□ -1.02
COL4A4-201ENST00000396625 IGHV1-69-2A0A0G2JMI3 117 aa8.71□□□□□ -1.02
COL4A4-201ENST00000396625 F2Z2F3 143 aa8.71□□□□□ -1.02
COL4A4-201ENST00000396625 IGKV1D-16P01601 117 aa8.71□□□□□ -1.02
COL4A4-201ENST00000396625 KIR3DS1Q14943 382 aa8.71□□□□□ -1.02
COL4A4-201ENST00000396625 SMAD7O15105 426 aaKnown RBP8.71□□□□□ -1.02
COL4A4-201ENST00000396625 HIST1H2BLQ99880 126 aa8.71□□□□□ -1.02
COL4A4-201ENST00000396625 MYOD1P15172 320 aa8.71□□□□□ -1.02
COL4A4-201ENST00000396625 A0A087X0K7 114 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 SELLP14151 372 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 ANAPC10Q9UM13 185 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 TRBV5-7A0A0A0MS05 114 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 TRGV11A0A075B6L2 103 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 A0A1W2PRE2 83 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 PPP1R27Q86WC6 154 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 BCL6BQ8N143 479 aaPredicted RBP8.7□□□□□ -1.02
COL4A4-201ENST00000396625 ABHD17AQ96GS6 310 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 GLRXP35754 106 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 C1orf100Q5SVJ3 147 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 C1QL4Q86Z23 238 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 GUSBP1Q15486 140 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 COL18A1P39060 1754 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 H3BMM0 161 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 CCL4P13236 92 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 CT83Q5H943 113 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 TMEM92Q6UXU6 159 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 UBE2WQ96B02 151 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.7□□□□□ -1.02
COL4A4-201ENST00000396625 CRIM1Q9NZV1 1036 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 TMEM8BA6NDV4 472 aa8.7□□□□□ -1.02
COL4A4-201ENST00000396625 SHANK3Q9BYB0 1731 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 PSG1P11464 419 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 LIMS1P48059 325 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 OR5P3Q8WZ94 311 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 PTPN13Q12923 2485 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 FABP5P3A8MUU1 101 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 CACNG8Q8WXS5 425 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 TNFSF13O75888 250 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 ACP7Q6ZNF0 438 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 TRAV41A0A0B4J266 112 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 RPL23P62829 140 aaKnown RBP8.69□□□□□ -1.02
COL4A4-201ENST00000396625 PLPPR1Q8TBJ4 325 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 FOXH1O75593 365 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 IFITM1P13164 125 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 OSR1Q8TAX0 266 aaPredicted RBP8.69□□□□□ -1.02
COL4A4-201ENST00000396625 VDAC2P45880 294 aaPredicted RBP8.69□□□□□ -1.02
COL4A4-201ENST00000396625 KLF17Q5JT82 389 aaPredicted RBP8.69□□□□□ -1.02
COL4A4-201ENST00000396625 KCNK17Q96T54 332 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 NGFRP08138 427 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 ZNRF1Q8ND25 227 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 C1orf162Q8NEQ5 155 aaPredicted RBP8.69□□□□□ -1.02
COL4A4-201ENST00000396625 TMEM54Q969K7 222 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 PLEKHB2Q96CS7 222 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 SLC50A1Q9BRV3 221 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 NUP210Q8TEM1 1887 aaPredicted RBP8.69□□□□□ -1.02
COL4A4-201ENST00000396625 MYO18BQ8IUG5 2567 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 TM4SF5O14894 197 aa8.69□□□□□ -1.02
COL4A4-201ENST00000396625 ZXDCQ2QGD7 858 aaPredicted RBP8.69□□□□□ -1.02
COL4A4-201ENST00000396625 CENPVL1A0A0U1RR11 272 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 SPRED2Q7Z698 418 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 IGHV1-45A0A0A0MS14 117 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 MLNRO43193 412 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 TEX43Q6ZNM6 134 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 FDCSPQ8NFU4 85 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 WBP1LQ9NX94 342 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 NPIPB13A6NJU9 1138 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 AHRRA9YTQ3 701 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 CCL1P22362 96 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 ERCC8Q13216 396 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 ZNF114Q8NC26 417 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 NEUROG3Q9Y4Z2 214 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 GLI3P10071 1580 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 A0A0J9YW62 118 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 CISD3P0C7P0 127 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 PRB3Q04118 309 aaPredicted RBP8.68□□□□□ -1.02
COL4A4-201ENST00000396625 UBE2V1Q13404 147 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 ATRAIDQ6UW56 229 aa8.68□□□□□ -1.02
COL4A4-201ENST00000396625 FBXL15Q9H469 300 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms