RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 BHLHA15Q7RTS1 189 aaPredicted RBP10.78□□□□□ -0.68
TRIM40-207ENST00000396581 ATP5L2Q7Z4Y8 100 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 RPRMLQ8N4K4 120 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 SNRNP40Q96DI7 357 aaKnown RBP10.78□□□□□ -0.68
TRIM40-207ENST00000396581 SMIM12Q96EX1 92 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 RPUSD1Q9UJJ7 312 aaKnown RBP10.78□□□□□ -0.68
TRIM40-207ENST00000396581 PPIAL4AQ9Y536 164 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 TRAV5A0A0B4J249 113 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 PEX7O00628 323 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 FAM87AP0C7U9 286 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 EBLN2Q6P2I7 272 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 NUDT10Q8NFP7 164 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 NUDT11Q96G61 164 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 LINC00479Q96M42 142 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 TNFRSF19Q9NS68 423 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 C1RLQ9NZP8 487 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 PRR14LQ5THK1 2151 aa10.78□□□□□ -0.68
TRIM40-207ENST00000396581 ZGRF1Q86YA3 2104 aa10.77□□□□□ -0.68
TRIM40-207ENST00000396581 TCF21O43680 179 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 NTF3P20783 257 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 MFAP2P55001 183 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 C3orf36Q3SXR2 165 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF833PQ6ZTB9 187 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 OR4F17Q8NGA8 305 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 OSR1Q8TAX0 266 aaPredicted RBP10.77□□□□□ -0.69
TRIM40-207ENST00000396581 ITLN1Q8WWA0 313 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 GAFA1Q96PS6 74 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 SSBP3Q9BWW4 388 aaPredicted RBP10.77□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF355PQ9NSJ1 428 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 CRXO43186 299 aaPredicted RBP10.77□□□□□ -0.69
TRIM40-207ENST00000396581 HSBP1O75506 76 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 GLRXP35754 106 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 LCN12Q6JVE5 192 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 DUX4L9Q6RFH8 374 aaPredicted RBP10.77□□□□□ -0.69
TRIM40-207ENST00000396581 NHLRC2Q8NBF2 726 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 OR10W1Q8NGF6 305 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 OR1L4Q8NGR5 311 aa10.77□□□□□ -0.69
TRIM40-207ENST00000396581 CACNA1AO00555 2505 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 ZZEF1O43149 2961 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 CCL25O15444 150 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 HIST1H1EP10412 219 aaKnown RBP10.76□□□□□ -0.69
TRIM40-207ENST00000396581 GNG10P50151 68 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 KLF3P57682 345 aaPredicted RBP10.76□□□□□ -0.69
TRIM40-207ENST00000396581 MAJINQ3KP22 176 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 FAM201AQ5SY85 155 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF474Q6S9Z5 364 aaPredicted RBP10.76□□□□□ -0.69
TRIM40-207ENST00000396581 PATE2Q6UY27 113 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF788Q6ZQV5 615 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 THAP8Q8NA92 274 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 FXYD5Q96DB9 178 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 PAXXQ9BUH6 204 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 RNF7Q9UBF6 113 aa10.76□□□□□ -0.69
TRIM40-207ENST00000396581 IGKV1D-37A0A075B6S9 117 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 VWC2LB2RUY7 222 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 PRRG2O14669 202 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 ERHP84090 104 aaKnown RBP10.75□□□□□ -0.69
TRIM40-207ENST00000396581 MUC15Q8N387 334 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 OR2T6Q8NHC8 308 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 URB1-AS1Q96HZ7 61 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF835Q9Y2P0 537 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 KLF12Q9Y4X4 402 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 COX11Q9Y6N1 276 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 TANC2Q9HCD6 1990 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 DSCAMO60469 2012 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 IGHV1-69-2A0A0G2JMI3 117 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 TCRBV4S1A1TA0A5B7 111 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 IGLC7A0M8Q6 106 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 M0R2Z0 102 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 SPRY3O43610 288 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 PYYP10082 97 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 IGLL1P15814 213 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 UBE2G1P62253 170 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 RPL8P62917 257 aaKnown RBP10.75□□□□□ -0.69
TRIM40-207ENST00000396581 TMEM177Q53S58 311 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 FAM162BQ5T6X4 162 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 C10orf113Q5VZT2 155 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF841Q6ZN19 808 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 ATOH7Q8N100 152 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 OR4A5Q8NH83 315 aa10.75□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF430Q9H8G1 570 aaPredicted RBP10.75□□□□□ -0.69
TRIM40-207ENST00000396581 POLEQ07864 2286 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 A0A1W2PN81 502 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 NKX6-3A6NJ46 265 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 HIGD1CA8MV81 97 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 BPIFB3P59826 476 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 SSBP2P81877 361 aaPredicted RBP10.74□□□□□ -0.69
TRIM40-207ENST00000396581 UBE2V1Q13404 147 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 FAM120AOSQ5T036 256 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 OR5AN1Q8NGI8 311 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 MLST8Q9BVC4 326 aa10.74□□□□□ -0.69
TRIM40-207ENST00000396581 FNDC4Q9H6D8 234 aaPredicted RBP10.74□□□□□ -0.69
TRIM40-207ENST00000396581 CGB1A6NKQ9 187 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 COX7A2P2O60397 106 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 CT83Q5H943 113 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 TIMM23BQ5SRD1 257 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 TEX36Q5VZQ5 186 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 GFRALQ6UXV0 394 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 ZNF738Q8NE65 137 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 OR2D3Q8NGH3 330 aa10.73□□□□□ -0.69
TRIM40-207ENST00000396581 TMEM167AQ8TBQ9 72 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms