RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 MMDQ15546 238 aa11.76□□□□□ -0.53
SREBF1-205ENST00000395757 ZNF788Q6ZQV5 615 aa11.76□□□□□ -0.53
SREBF1-205ENST00000395757 RNASE6Q93091 150 aaKnown RBP11.76□□□□□ -0.53
SREBF1-205ENST00000395757 EAF1Q96JC9 268 aaPredicted RBP11.76□□□□□ -0.53
SREBF1-205ENST00000395757 NOL4LQ96MY1 436 aaPredicted RBP11.76□□□□□ -0.53
SREBF1-205ENST00000395757 RAXQ9Y2V3 346 aa11.76□□□□□ -0.53
SREBF1-205ENST00000395757 IFITM10A6NMD0 228 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 UPK2O00526 184 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 PRRX1P54821 245 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 PNKDQ8N490 385 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 CRISP2P16562 243 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 VDAC2P45880 294 aaPredicted RBP11.75□□□□□ -0.53
SREBF1-205ENST00000395757 KLF17Q5JT82 389 aaPredicted RBP11.75□□□□□ -0.53
SREBF1-205ENST00000395757 TCTEX1D1Q8N7M0 179 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 SUB1P53999 127 aaKnown RBP eCLIP11.75□□□□□ -0.538e-8■■□□□ 11.8
SREBF1-205ENST00000395757 C10orf113Q5VZT2 155 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 MUC15Q8N387 334 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 TMEM170AQ8WVE7 144 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 RITA1Q96K30 269 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 PAM16Q9Y3D7 125 aa11.75□□□□□ -0.53
SREBF1-205ENST00000395757 MYO9AB2RTY4 2548 aa11.74□□□□□ -0.53
SREBF1-205ENST00000395757 BTF3L4Q96K17 158 aa11.74□□□□□ -0.53
SREBF1-205ENST00000395757 USP9XQ93008 2570 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-205ENST00000395757 TET2Q6N021 2002 aaPredicted RBP11.74□□□□□ -0.53
SREBF1-205ENST00000395757 SONP18583 2426 aaKnown RBP11.74□□□□□ -0.53
SREBF1-205ENST00000395757 AMBPP02760 352 aa11.74□□□□□ -0.53
SREBF1-205ENST00000395757 PAXXQ9BUH6 204 aa11.74□□□□□ -0.53
SREBF1-205ENST00000395757 TRBV20OR9-2A0A075B6H5 130 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 F2RL2O00254 374 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 MPDU1O75352 247 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 STAG3L2P0CL84 134 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 AREGP15514 252 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 GUSBP1Q15486 140 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 MORN5Q5VZ52 161 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 IGFL2Q6UWQ7 119 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 ERASQ7Z444 233 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 MMD2Q8IY49 270 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 ATOH7Q8N100 152 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 VN1R17PQ8TDU5 208 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 ZNF331Q9NQX6 463 aaPredicted RBP11.73□□□□□ -0.53
SREBF1-205ENST00000395757 IGHV3OR16-13A0A075B7E8 117 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 IGHV3OR16-10A0A075B7F0 116 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 TMSB15BA0A087X1C1 80 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 IGHV3-74A0A0B4J1X5 117 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 E7EQL1 145 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
SREBF1-205ENST00000395757 ODF1Q14990 250 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 PGPA6NDG6 321 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 KLRD1Q13241 179 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 SCGB2A2Q13296 93 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 RPEL1Q2QD12 228 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 CMTM2Q8TAZ6 248 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 DAZAP1Q96EP5 407 aaKnown RBP11.73□□□□□ -0.53
SREBF1-205ENST00000395757 SLC25A33Q9BSK2 321 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 MRPL18Q9H0U6 180 aaKnown RBP11.73□□□□□ -0.53
SREBF1-205ENST00000395757 TNFRSF19Q9NS68 423 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 LINC00312Q9Y6C7 94 aa11.73□□□□□ -0.53
SREBF1-205ENST00000395757 MUC21A0A0G2JKD1 596 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 MUC21A0A140T8X8 626 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 ZNF253O75346 499 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 ADMP35318 185 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 GPR6P46095 362 aaPredicted RBP11.72□□□□□ -0.53
SREBF1-205ENST00000395757 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
SREBF1-205ENST00000395757 AMTP48728 403 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 MFAP2P55001 183 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 LY6DQ14210 128 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 MUC21Q5SSG8 566 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 OR2D3Q8NGH3 330 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 FAM222BQ8WU58 562 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 SLAQ13239 276 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 HSPB9Q9BQS6 159 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 WASHC3Q9Y3C0 194 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 SELENOKQ9Y6D0 94 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 SORL1Q92673 2214 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 PPIAL4CA0A0B4J2A2 164 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 A0A1W2PN81 502 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 TMEM178BH3BS89 294 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 CSN3P07498 182 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 PPIAL4GP0DN37 164 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 LDLRAD2Q5SZI1 272 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 LINC00305Q7Z4B0 112 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 FAM19A2Q8N3H0 131 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 FKBP11Q9NYL4 201 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 CTSZQ9UBR2 303 aa11.72□□□□□ -0.53
SREBF1-205ENST00000395757 OR5B3Q8NH48 314 aa11.71□□□□□ -0.53
SREBF1-205ENST00000395757 SSBP4Q9BWG4 385 aaPredicted RBP11.71□□□□□ -0.53
SREBF1-205ENST00000395757 IGKV1OR2-108A0A075B7D4 117 aa11.71□□□□□ -0.53
SREBF1-205ENST00000395757 ELOA3CA0A087WX78 387 aaPredicted RBP11.71□□□□□ -0.53
SREBF1-205ENST00000395757 C8orf88P0DMB2 117 aa11.71□□□□□ -0.53
SREBF1-205ENST00000395757 CDKN1AP38936 164 aa11.71□□□□□ -0.53
SREBF1-205ENST00000395757 TCTAP57738 103 aa11.71□□□□□ -0.53
SREBF1-205ENST00000395757 IBA57Q5T440 356 aaKnown RBP11.71□□□□□ -0.53
SREBF1-205ENST00000395757 TEX38Q6PEX7 206 aa11.71□□□□□ -0.53
SREBF1-205ENST00000395757 IGLV3-9A0A075B6K5 115 aa11.71□□□□□ -0.54
SREBF1-205ENST00000395757 TRBV24-1A0A075B6N3 115 aa11.71□□□□□ -0.54
SREBF1-205ENST00000395757 PRCDQ00LT1 54 aa11.71□□□□□ -0.54
SREBF1-205ENST00000395757 TBR1Q16650 682 aa11.71□□□□□ -0.54
SREBF1-205ENST00000395757 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms