RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 CBLN1P23435 193 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 VMA21Q3ZAQ7 101 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 RUSC1-AS1Q66K80 236 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 C8orf46Q8TAG6 207 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 CACNG8Q8WXS5 425 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 BTF3L4Q96K17 158 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 SLC35E1Q96K37 410 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 PYGO2Q9BRQ0 406 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 CLEC7AQ9BXN2 247 aa11.21□□□□□ -0.62
SNCA-204ENST00000394989 MRPL36Q9P0J6 103 aaKnown RBP11.21□□□□□ -0.62
SNCA-204ENST00000394989 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 PSMB11A5LHX3 300 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 C22orf46C9J442 243 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 CRYGBP07316 175 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 FRMD6-AS1P0C7T7 363 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 LGALS7P47929 136 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 ACTL10Q5JWF8 245 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 LDLRAD2Q5SZI1 272 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 ATOH7Q8N100 152 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 SGMS2Q8NHU3 365 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 TXNDC17Q9BRA2 123 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 COX7A1P24310 79 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 ADMP35318 185 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 ARHGAP32A7KAX9 2087 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 PRRX1P54821 245 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 SLC35B1P78383 322 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 Q6ZWC4 215 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 RNASE8Q8TDE3 154 aaKnown RBP11.2□□□□□ -0.62
SNCA-204ENST00000394989 VAMP8Q9BV40 100 aa11.2□□□□□ -0.62
SNCA-204ENST00000394989 HIVEP3Q5T1R4 2406 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 A0A1W2PPR1 153 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 IGLC7A0M8Q6 106 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 OR5G3P0C626 314 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 MORN5Q5VZ52 161 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 C19orf35Q6ZS72 473 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 BAGE3Q86Y29 109 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 BAGE2Q86Y30 109 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 LY6G5BQ8NDX9 201 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 ANAPC16Q96DE5 110 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 INSIG2Q9Y5U4 225 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 LOC102724200A0A096LPH7 203 aaPredicted RBP11.19□□□□□ -0.62
SNCA-204ENST00000394989 RBP4P02753 201 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 PSG5Q15238 335 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 KIAA1644Q3SXP7 199 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 KCNIP4Q6PIL6 250 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 PNKDQ8N490 385 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 OR8B3Q8NGG8 313 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 OR8B2Q96RD0 313 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 RAB1BQ9H0U4 201 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 PPP1R14DQ9NXH3 145 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
SNCA-204ENST00000394989 LY6LH3BQJ8 138 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 MFAP2P55001 183 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 TEX45Q8NA69 505 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 APELAP0DMC3 54 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 PTTG1IPP53801 180 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 ZNF90Q03938 601 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 SIGLEC9Q9Y336 463 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 ZFHX3Q15911 3703 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 SLC17A3O00476 420 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 AREGP15514 252 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 PRR31Q5SQ13 230 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 NPIPB3Q92617 1050 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 ONECUT1Q9UBC0 465 aa11.18□□□□□ -0.62
SNCA-204ENST00000394989 SERF1AO75920 110 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 LGALS4P56470 323 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 COA6Q5JTJ3 125 aaKnown RBP11.17□□□□□ -0.62
SNCA-204ENST00000394989 C11orf52Q96A22 123 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 TXN2Q99757 166 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 SLC25A33Q9BSK2 321 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 WNT10AQ9GZT5 417 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 COL12A1Q99715 3063 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 KIR2DL5BA0A0G2JN68 375 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 KIR2DL5BA0A0G2JPC4 375 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 MT-CO2P00403 227 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 OR10J4P0C629 311 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 PVRIGQ6DKI7 326 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 HCP5Q6MZN7 132 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 KIR2DL5AQ8N109 375 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 OR1L6Q8NGR2 347 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 OCC1Q8TAD7 63 aa11.17□□□□□ -0.62
SNCA-204ENST00000394989 TECRQ9NZ01 308 aaKnown RBP11.17□□□□□ -0.62
SNCA-204ENST00000394989 SPTBN1Q01082 2364 aaKnown RBP11.17□□□□□ -0.62
SNCA-204ENST00000394989 LIPFP07098 398 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 TNXAQ16473 311 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 FAM167A-AS1Q96KT0 104 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 C19orf24Q9BVV8 132 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 RNF114Q9Y508 228 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 TRAV5A0A0B4J249 113 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 K7EN84 100 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 CD99P14209 185 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 PMCHP20382 165 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 COMPP49747 757 aaPredicted RBP11.16□□□□□ -0.62
SNCA-204ENST00000394989 MMD2Q8IY49 270 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 MIEN1Q9BRT3 115 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 SLC25A2Q9BXI2 301 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 PRORYQ9H606 182 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 OR7C2O60412 319 aa11.16□□□□□ -0.62
SNCA-204ENST00000394989 GGCTO75223 188 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms