RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 DEFB114Q30KQ6 69 aa15.06■□□□□ 0
SNCA-203ENST00000394986 BTNL8Q6UX41 500 aa15.06■□□□□ 0
SNCA-203ENST00000394986 TOMM20LQ6UXN7 152 aa15.06■□□□□ 0
SNCA-203ENST00000394986 ZNF600Q6ZNG1 722 aa15.06■□□□□ 0
SNCA-203ENST00000394986 SMIM8Q96KF7 97 aa15.06■□□□□ 0
SNCA-203ENST00000394986 PRSS46E5RG02 174 aa15.05■□□□□ -0
SNCA-203ENST00000394986 K7EPK0 472 aa15.05■□□□□ -0
SNCA-203ENST00000394986 CCNKO75909 580 aa15.05■□□□□ -0
SNCA-203ENST00000394986 OR10J1P30954 320 aa15.05■□□□□ -0
SNCA-203ENST00000394986 ELLP55199 621 aaPredicted RBP15.05■□□□□ -0
SNCA-203ENST00000394986 GAMTQ14353 236 aa15.05■□□□□ -0
SNCA-203ENST00000394986 ZFAND3Q9H8U3 227 aa15.05■□□□□ -0
SNCA-203ENST00000394986 IGHV3-49A0A0A0MS15 119 aa15.04■□□□□ -0
SNCA-203ENST00000394986 C7orf66A4D0T2 115 aa15.04■□□□□ -0
SNCA-203ENST00000394986 SSNA1O43805 119 aa15.04■□□□□ -0
SNCA-203ENST00000394986 C8orf88P0DMB2 117 aa15.04■□□□□ -0
SNCA-203ENST00000394986 GPX4P36969 197 aaPredicted RBP15.04■□□□□ -0
SNCA-203ENST00000394986 S100A10P60903 97 aa15.04■□□□□ -0
SNCA-203ENST00000394986 SLC35E1Q96K37 410 aa15.04■□□□□ -0
SNCA-203ENST00000394986 RAB40CQ96S21 281 aa15.04■□□□□ -0
SNCA-203ENST00000394986 MRPL27Q9P0M9 148 aaKnown RBP15.04■□□□□ -0
SNCA-203ENST00000394986 IL15RAQ13261 267 aa15.03■□□□□ -0
SNCA-203ENST00000394986 DCTN2Q13561 401 aaKnown RBP15.03■□□□□ -0
SNCA-203ENST00000394986 RAB32Q13637 225 aa15.03■□□□□ -0
SNCA-203ENST00000394986 OR8G2PQ6IF36 304 aa15.03■□□□□ -0
SNCA-203ENST00000394986 OR1S2Q8NGQ3 325 aa15.03■□□□□ -0
SNCA-203ENST00000394986 MARC2Q969Z3 335 aa15.03■□□□□ -0
SNCA-203ENST00000394986 WDR89Q96FK6 387 aaPredicted RBP15.03■□□□□ -0
SNCA-203ENST00000394986 ALG5Q9Y673 324 aa15.03■□□□□ -0
SNCA-203ENST00000394986 IGHV3OR16-13A0A075B7E8 117 aa15.02■□□□□ -0
SNCA-203ENST00000394986 TRAV30A0A087WSZ9 112 aa15.02■□□□□ -0
SNCA-203ENST00000394986 IGHV3-74A0A0B4J1X5 117 aa15.02■□□□□ -0
SNCA-203ENST00000394986 K7EMT4 169 aa15.02■□□□□ -0
SNCA-203ENST00000394986 SCGB2A1O75556 95 aa15.02■□□□□ -0
SNCA-203ENST00000394986 METTL15P1P0C7V9 234 aa15.02■□□□□ -0
SNCA-203ENST00000394986 DEFB121Q5J5C9 76 aa15.02■□□□□ -0
SNCA-203ENST00000394986 LCN12Q6JVE5 192 aa15.02■□□□□ -0
SNCA-203ENST00000394986 ACOT7LQ6ZUV0 252 aa15.02■□□□□ -0
SNCA-203ENST00000394986 TMEM61Q8N0U2 210 aa15.02■□□□□ -0
SNCA-203ENST00000394986 TECRQ9NZ01 308 aaKnown RBP15.02■□□□□ -0
SNCA-203ENST00000394986 PMS2P5A8MQ11 134 aa15.01□□□□□ -0.01
SNCA-203ENST00000394986 TSC22D2O75157 780 aa15.01□□□□□ -0.01
SNCA-203ENST00000394986 TMEM14EPQ6UXP3 125 aa15.01□□□□□ -0.01
SNCA-203ENST00000394986 OR2K2Q8NGT1 345 aa15.01□□□□□ -0.01
SNCA-203ENST00000394986 C11orf1Q9H5F2 150 aa15.01□□□□□ -0.01
SNCA-203ENST00000394986 IGKV1D-37A0A075B6S9 117 aa15□□□□□ -0.01
SNCA-203ENST00000394986 TRAV14DV4A0A0A6YYC5 116 aa15□□□□□ -0.01
SNCA-203ENST00000394986 IGHV7-4-1A0A0J9YVY3 117 aa15□□□□□ -0.01
SNCA-203ENST00000394986 L7N2F9 121 aa15□□□□□ -0.01
SNCA-203ENST00000394986 TAS2R30P59541 319 aa15□□□□□ -0.01
SNCA-203ENST00000394986 VAMP2P63027 116 aa15□□□□□ -0.01
SNCA-203ENST00000394986 SMPXQ9UHP9 88 aa15□□□□□ -0.01
SNCA-203ENST00000394986 IGKV1OR2-108A0A075B7D4 117 aa15□□□□□ -0.01
SNCA-203ENST00000394986 IGHV3-66A0A0C4DH42 116 aa15□□□□□ -0.01
SNCA-203ENST00000394986 ZFP92A6NM28 416 aa15□□□□□ -0.01
SNCA-203ENST00000394986 ZNF785A8K8V0 405 aa15□□□□□ -0.01
SNCA-203ENST00000394986 SCAF4O95104 1147 aaKnown RBP15□□□□□ -0.01
SNCA-203ENST00000394986 APOHP02749 345 aaPredicted RBP15□□□□□ -0.01
SNCA-203ENST00000394986 H2BFSP57053 126 aa15□□□□□ -0.01
SNCA-203ENST00000394986 YPEL3P61236 119 aaPredicted RBP15□□□□□ -0.01
SNCA-203ENST00000394986 RRAS2P62070 204 aaPredicted RBP15□□□□□ -0.01
SNCA-203ENST00000394986 GUCA2BQ16661 112 aa15□□□□□ -0.01
SNCA-203ENST00000394986 GINS3Q9BRX5 216 aa15□□□□□ -0.01
SNCA-203ENST00000394986 RHPN1-AS1Q9BWJ2 59 aa15□□□□□ -0.01
SNCA-203ENST00000394986 MGAT4CQ9UBM8 478 aa15□□□□□ -0.01
SNCA-203ENST00000394986 LSM4Q9Y4Z0 139 aaKnown RBP15□□□□□ -0.01
SNCA-203ENST00000394986 CHEK1O14757 476 aa14.99□□□□□ -0.01
SNCA-203ENST00000394986 ZNF90Q03938 601 aa14.99□□□□□ -0.01
SNCA-203ENST00000394986 ARL16Q0P5N6 197 aa14.99□□□□□ -0.01
SNCA-203ENST00000394986 RGS21Q2M5E4 152 aa14.99□□□□□ -0.01
SNCA-203ENST00000394986 Q8WTZ3 238 aa14.99□□□□□ -0.01
SNCA-203ENST00000394986 SMCO3A2RU48 225 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 TOMM40O96008 361 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 PSG1P11464 419 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 BCAP31P51572 246 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 CAV2P51636 162 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 AKR1C1Q04828 323 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 LRRC37A5PQ49AS3 106 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 ST8SIA2Q92186 375 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 RNF2Q99496 336 aa14.98□□□□□ -0.01
SNCA-203ENST00000394986 FAM24AA6NFZ4 105 aa14.97□□□□□ -0.01
SNCA-203ENST00000394986 IL4P05112 153 aa14.97□□□□□ -0.01
SNCA-203ENST00000394986 RD3LP0DJH9 198 aa14.97□□□□□ -0.01
SNCA-203ENST00000394986 USF2Q15853 346 aaPredicted RBP14.97□□□□□ -0.01
SNCA-203ENST00000394986 Q8N1Y9 231 aa14.97□□□□□ -0.01
SNCA-203ENST00000394986 THAP8Q8NA92 274 aa14.97□□□□□ -0.01
SNCA-203ENST00000394986 NMES1Q9C002 83 aa14.97□□□□□ -0.01
SNCA-203ENST00000394986 SORL1Q92673 2214 aa14.96□□□□□ -0.01
SNCA-203ENST00000394986 PVALBP20472 110 aaPredicted RBP14.96□□□□□ -0.01
SNCA-203ENST00000394986 OR2F1Q13607 317 aa14.96□□□□□ -0.01
SNCA-203ENST00000394986 RBPMS2Q6ZRY4 209 aaKnown RBP14.96□□□□□ -0.01
SNCA-203ENST00000394986 LILRB2Q8N423 598 aa14.96□□□□□ -0.01
SNCA-203ENST00000394986 OR10P1Q8NGE3 313 aa14.96□□□□□ -0.01
SNCA-203ENST00000394986 IGSF23A1L1A6 192 aa14.95□□□□□ -0.02
SNCA-203ENST00000394986 DEDDO75618 318 aa14.95□□□□□ -0.02
SNCA-203ENST00000394986 CST7O76096 145 aa14.95□□□□□ -0.02
SNCA-203ENST00000394986 CD7P09564 240 aa14.95□□□□□ -0.02
SNCA-203ENST00000394986 DLK1P80370 383 aa14.95□□□□□ -0.02
SNCA-203ENST00000394986 OR51G1Q8NGK1 321 aa14.95□□□□□ -0.02
SNCA-203ENST00000394986 METTL26Q96S19 204 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms