RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 IFNA21P01568 189 aa15.11■□□□□ 0.01
TRAF4-203ENST00000394925 IGLC1P0CG04 106 aa15.11■□□□□ 0.01
TRAF4-203ENST00000394925 EMP1P54849 157 aa15.11■□□□□ 0.01
TRAF4-203ENST00000394925 BSXQ3C1V8 233 aa15.11■□□□□ 0.01
TRAF4-203ENST00000394925 SP6Q3SY56 376 aa15.11■□□□□ 0.01
TRAF4-203ENST00000394925 RPS10-NUDT3A0A1W2PQS6 291 aa15.1■□□□□ 0.01
TRAF4-203ENST00000394925 SPART-AS1P0CW21 52 aa15.1■□□□□ 0.01
TRAF4-203ENST00000394925 DHODHQ02127 395 aa15.1■□□□□ 0.01
TRAF4-203ENST00000394925 OR1S2Q8NGQ3 325 aa15.1■□□□□ 0.01
TRAF4-203ENST00000394925 RNASE11Q8TAA1 199 aaKnown RBP15.1■□□□□ 0.01
TRAF4-203ENST00000394925 RRNAD1Q96FB5 475 aaKnown RBP15.1■□□□□ 0.01
TRAF4-203ENST00000394925 APOA1P02647 267 aa15.09■□□□□ 0.01
TRAF4-203ENST00000394925 OR10J1P30954 320 aa15.09■□□□□ 0.01
TRAF4-203ENST00000394925 RND2P52198 227 aa15.09■□□□□ 0.01
TRAF4-203ENST00000394925 USF2Q15853 346 aaPredicted RBP15.09■□□□□ 0.01
TRAF4-203ENST00000394925 RNASE12Q5GAN4 147 aaKnown RBP15.09■□□□□ 0.01
TRAF4-203ENST00000394925 PRSS54Q6PEW0 395 aa15.09■□□□□ 0.01
TRAF4-203ENST00000394925 LHFPL1Q86WI0 220 aa15.09■□□□□ 0.01
TRAF4-203ENST00000394925 ZNF575Q86XF7 245 aa15.09■□□□□ 0.01
TRAF4-203ENST00000394925 KRTAP4-5Q9BYR2 181 aa15.09■□□□□ 0.01
TRAF4-203ENST00000394925 NRN1Q9NPD7 142 aa15.09■□□□□ 0.01
TRAF4-203ENST00000394925 CD74P04233 296 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 IL4P05112 153 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 HTR2BP41595 481 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 SPCS3P61009 180 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 YPEL3P61236 119 aaPredicted RBP15.08■□□□□ 0
TRAF4-203ENST00000394925 ZNF705AQ6ZN79 300 aaPredicted RBP15.08■□□□□ 0
TRAF4-203ENST00000394925 Q6ZR54 194 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 Q6ZRM9 215 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 YIPF6Q96EC8 236 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 NEU1Q99519 415 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 SEPSECSQ9HD40 501 aaKnown RBP15.08■□□□□ 0
TRAF4-203ENST00000394925 COPZ2Q9P299 210 aa15.08■□□□□ 0
TRAF4-203ENST00000394925 IGHV3OR16-12A0A075B7B8 117 aa15.07■□□□□ 0
TRAF4-203ENST00000394925 ATP6V1G2O95670 118 aa15.07■□□□□ 0
TRAF4-203ENST00000394925 IGKV3-20P01619 116 aa15.07■□□□□ 0
TRAF4-203ENST00000394925 HLA-DRB4P13762 266 aa15.07■□□□□ 0
TRAF4-203ENST00000394925 FXYD7P58549 80 aa15.07■□□□□ 0
TRAF4-203ENST00000394925 RNASE10Q5GAN6 216 aaKnown RBP15.07■□□□□ 0
TRAF4-203ENST00000394925 SIGLEC15Q6ZMC9 328 aa15.07■□□□□ 0
TRAF4-203ENST00000394925 HEYLQ9NQ87 328 aaPredicted RBP15.07■□□□□ 0
TRAF4-203ENST00000394925 HLA-DRB4X5D2U9 266 aa15.07■□□□□ 0
TRAF4-203ENST00000394925 TMEM189A5PLL7 270 aa15.06■□□□□ 0
TRAF4-203ENST00000394925 ZNF705FA8MVS1 300 aaPredicted RBP15.06■□□□□ 0
TRAF4-203ENST00000394925 ZNF705DP0CH99 300 aaPredicted RBP15.06■□□□□ 0
TRAF4-203ENST00000394925 ZNF705BP0CI00 300 aaPredicted RBP15.06■□□□□ 0
TRAF4-203ENST00000394925 SLC25A4P12235 298 aa15.06■□□□□ 0
TRAF4-203ENST00000394925 ELK1P19419 428 aa15.06■□□□□ 0
TRAF4-203ENST00000394925 UCP1P25874 307 aa15.06■□□□□ 0
TRAF4-203ENST00000394925 KLK11Q9UBX7 282 aa15.06■□□□□ 0
TRAF4-203ENST00000394925 SMIM9A6NGZ8 99 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 BUB3O43684 328 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 HPGDSO60760 199 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 CD3DP04234 171 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 DEFB1P60022 68 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 SOHLH1Q5JUK2 328 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 GDF5OSQ5U4N7 250 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 CCDC71LQ8N9Z2 235 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 FAM210BQ96KR6 192 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.05■□□□□ -0
TRAF4-203ENST00000394925 PLA2G2EQ9NZK7 142 aa15.05■□□□□ -0
TRAF4-203ENST00000394925 HTN3P15516 51 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 NKX2-1P43699 371 aaPredicted RBP15.04■□□□□ -0
TRAF4-203ENST00000394925 C2orf83Q53S99 150 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 ARRDC1Q8N5I2 433 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 OR52E5Q8NH55 327 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 ZFAND1Q8TCF1 268 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 RNASEH2CQ8TDP1 164 aaKnown RBP15.04■□□□□ -0
TRAF4-203ENST00000394925 NPIPB3Q92617 1050 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 NIPSNAP3BQ9BS92 247 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 DKK2Q9UBU2 259 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 RFNGQ9Y644 331 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 NACAE9PAV3 2078 aa15.04■□□□□ -0
TRAF4-203ENST00000394925 HSPG2P98160 4391 aa15.03■□□□□ -0
TRAF4-203ENST00000394925 GSTZ1O43708 216 aaPredicted RBP15.03■□□□□ -0
TRAF4-203ENST00000394925 RD3LP0DJH9 198 aa15.03■□□□□ -0
TRAF4-203ENST00000394925 AARDQ4LEZ3 155 aa15.03■□□□□ -0
TRAF4-203ENST00000394925 FAM222AQ5U5X8 452 aa15.03■□□□□ -0
TRAF4-203ENST00000394925 SLC24A4Q8NFF2 622 aa15.03■□□□□ -0
TRAF4-203ENST00000394925 OR13C8Q8NGS7 320 aa15.03■□□□□ -0
TRAF4-203ENST00000394925 ACY3Q96HD9 319 aa15.03■□□□□ -0
TRAF4-203ENST00000394925 NXPH3O95157 252 aa15.02■□□□□ -0
TRAF4-203ENST00000394925 TOMM40O96008 361 aa15.02■□□□□ -0
TRAF4-203ENST00000394925 SCGB2B2Q4G0G5 96 aa15.02■□□□□ -0
TRAF4-203ENST00000394925 FAM219AQ8IW50 185 aa15.02■□□□□ -0
TRAF4-203ENST00000394925 OR4D10Q8NGI6 311 aa15.02■□□□□ -0
TRAF4-203ENST00000394925 OR52I2Q8NH67 350 aa15.02■□□□□ -0
TRAF4-203ENST00000394925 TMEM170AQ8WVE7 144 aa15.02■□□□□ -0
TRAF4-203ENST00000394925 LINC00052Q96N35 136 aa15.02■□□□□ -0
TRAF4-203ENST00000394925 CEBPZOSA8MTT3 80 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 FAM25AB3EWG3 89 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 FAM25CB3EWG5 89 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 FAM25GB3EWG6 89 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 PSG1P11464 419 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 NCS1P62166 190 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 RNF212Q495C1 297 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 C1orf134Q5TEV5 83 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 ETFRF1Q6IPR1 90 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 OR51G1Q8NGK1 321 aa15.01□□□□□ -0.01
TRAF4-203ENST00000394925 TERB2Q8NHR7 220 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms