RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 HTR2BP41595 481 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 APOC4P55056 127 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 DEFB131AP59861 70 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 USF2Q15853 346 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-205ENST00000394892 LEMD1Q68G75 181 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 SLC24A4Q8NFF2 622 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 RNASE11Q8TAA1 199 aaKnown RBP6.47□□□□□ -1.37
ATG4A-205ENST00000394892 DCANP1Q8TF63 244 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 GLMPQ8WWB7 406 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 NPIPB3Q92617 1050 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 IL22RA2Q969J5 263 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 CSTL1Q9H114 145 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 RBKSQ9H477 322 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 HEYLQ9NQ87 328 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-205ENST00000394892 MCUBQ9NWR8 336 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 RABL2AQ9UBK7 228 aaPredicted RBP6.47□□□□□ -1.37
ATG4A-205ENST00000394892 HSPB7Q9UBY9 170 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 RABL2BQ9UNT1 228 aa6.47□□□□□ -1.37
ATG4A-205ENST00000394892 A0A0B4J2A0 478 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 KNCNA6PVL3 124 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 CORTO00230 105 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 SULT1A3P0DMM9 295 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 SULT1A4P0DMN0 295 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 NPPCP23582 126 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 OR10J1P30954 320 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 BMI1P35226 326 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 P2RY1P47900 373 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 SUB1P53999 127 aaKnown RBP eCLIP6.46□□□□□ -1.38
ATG4A-205ENST00000394892 PMS2P11Q13670 270 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 C16orf54Q6UWD8 224 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 RNASEH2CQ8TDP1 164 aaKnown RBP6.46□□□□□ -1.38
ATG4A-205ENST00000394892 SDHCQ99643 169 aaPredicted RBP6.46□□□□□ -1.38
ATG4A-205ENST00000394892 GINS3Q9BRX5 216 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 PDCD10Q9BUL8 212 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 ENY2Q9NPA8 101 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 SHPKQ9UHJ6 478 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 SCP2D1Q9UJQ7 156 aa6.46□□□□□ -1.38
ATG4A-205ENST00000394892 TRAV2A0A0B4J234 112 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 C4BPBP20851 252 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 NPY1RP25929 384 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 CCR6P51684 374 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 YPEL3P61236 119 aaPredicted RBP6.45□□□□□ -1.38
ATG4A-205ENST00000394892 SMCO1Q147U7 214 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 BAK1Q16611 211 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 PYDC2Q56P42 97 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 CEMP1Q6PRD7 247 aaPredicted RBP6.45□□□□□ -1.38
ATG4A-205ENST00000394892 TRPT1Q86TN4 253 aaKnown RBP6.45□□□□□ -1.38
ATG4A-205ENST00000394892 TMEM217Q8N7C4 229 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 OR1S2Q8NGQ3 325 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 DTD1Q8TEA8 209 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 C17orf77Q96MU5 243 aa6.45□□□□□ -1.38
ATG4A-205ENST00000394892 IGKV1OR2-108A0A075B7D4 117 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 MPTX1A8MV57 137 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 PRSS46E5RG02 174 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 DEFB4AO15263 64 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 ZNF688P0C7X2 276 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 PSG1P11464 419 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 SLC25A4P12235 298 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 ATF4P18848 351 aaPredicted RBP6.44□□□□□ -1.38
ATG4A-205ENST00000394892 DEFB1P60022 68 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 ZNF90Q03938 601 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 PPP1R1AQ13522 171 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 GAMTQ14353 236 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 LGI3Q8N145 548 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 LRTM2Q8N967 370 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 STXBP6Q8NFX7 210 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 ACY3Q96HD9 319 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 METTL26Q96S19 204 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 SRRQ9GZT4 340 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 RABAC1Q9UI14 185 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 KCNIP3Q9Y2W7 256 aa6.44□□□□□ -1.38
ATG4A-205ENST00000394892 FRAS1Q86XX4 4008 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 TRAV30A0A087WSZ9 112 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 RPS10-NUDT3A0A1W2PQS6 291 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 DNASE2O00115 360 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-205ENST00000394892 BUB3O43684 328 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 TOMM40O96008 361 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 CA1P00915 261 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-205ENST00000394892 IFNA10P01566 189 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 IL4P05112 153 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 CD5P06127 495 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 RBMY1A1P0DJD3 496 aaKnown RBP6.43□□□□□ -1.38
ATG4A-205ENST00000394892 RBMY1CP0DJD4 496 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 IAPPP10997 89 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 BTCP35070 178 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 CMC4P56277 68 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-205ENST00000394892 NANOS2P60321 138 aaKnown RBP6.43□□□□□ -1.38
ATG4A-205ENST00000394892 RPL11P62913 178 aaKnown RBP6.43□□□□□ -1.38
ATG4A-205ENST00000394892 RBMY1FQ15415 496 aaKnown RBP6.43□□□□□ -1.38
ATG4A-205ENST00000394892 TMEM128Q5BJH2 165 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 TMEM182Q6ZP80 229 aaPredicted RBP6.43□□□□□ -1.38
ATG4A-205ENST00000394892 TMED4Q7Z7H5 227 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 Q8NAQ8 132 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 CSNK1G2-AS1Q8NCQ2 148 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 OR51G1Q8NGK1 321 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 OR11H2Q8NH07 326 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 GRAMD2BQ96HH9 432 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 SCGB3A2Q96PL1 93 aa6.43□□□□□ -1.38
ATG4A-205ENST00000394892 RARRES2Q99969 163 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms