RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 TNFRSF19Q9NS68 423 aa11.81□□□□□ -0.52
CCT4-201ENST00000394440 CSMD1Q96PZ7 3565 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 IGHV3-21A0A0B4J1V1 117 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 A0A0U1RQK1 487 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 AVPP01185 164 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 BTF3P20290 206 aaKnown RBP11.8□□□□□ -0.52
CCT4-201ENST00000394440 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
CCT4-201ENST00000394440 OR4X1Q8NH49 305 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 FANCD2OSQ96PS1 177 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 HSPB9Q9BQS6 159 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 MRPL32Q9BYC8 188 aaKnown RBP11.8□□□□□ -0.52
CCT4-201ENST00000394440 PUS1Q9Y606 427 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCT4-201ENST00000394440 CELSR1Q9NYQ6 3014 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 C7orf77A4D0Y5 90 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 LOXL1Q08397 574 aaPredicted RBP11.8□□□□□ -0.52
CCT4-201ENST00000394440 PATE2Q6UY27 113 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 NANPQ8TBE9 248 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 ZNF503Q96F45 646 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 RNF2Q99496 336 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 C20orf24Q9BUV8 137 aa11.8□□□□□ -0.52
CCT4-201ENST00000394440 ABCA12Q86UK0 2595 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 TEX15Q9BXT5 2789 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 IGLC1P0CG04 106 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 RHEBQ15382 184 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 LINC01356Q8N9X3 169 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 NIPSNAP3BQ9BS92 247 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 C11orf94C9JXX5 98 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 OR4F5Q8NH21 305 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 OR4F4Q96R69 305 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 PFDN5Q99471 154 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 RASL11BQ9BPW5 248 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 DNAJC4Q9NNZ3 241 aa11.79□□□□□ -0.52
CCT4-201ENST00000394440 TECRQ9NZ01 308 aaKnown RBP11.79□□□□□ -0.52
CCT4-201ENST00000394440 M0R036 132 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 ATP5G3P48201 142 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 MORN5Q5VZ52 161 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 PQLC2Q6ZP29 291 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 C5orf56Q8N8D9 126 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 OR1L4Q8NGR5 311 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 FAM167A-AS1Q96KT0 104 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 TXNDC17Q9BRA2 123 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 MAP1AP78559 2803 aaPredicted RBP11.78□□□□□ -0.52
CCT4-201ENST00000394440 PLP1P60201 277 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 UBE2G2P60604 165 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 SGMS2Q8NHU3 365 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 TVP23CQ96ET8 276 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 RBM14Q96PK6 669 aaKnown RBP11.78□□□□□ -0.52
CCT4-201ENST00000394440 RPS10P5Q9NQ39 176 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 ARL2-SNX15V9GYD0 113 aa11.78□□□□□ -0.52
CCT4-201ENST00000394440 CLN5O75503 358 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 C8orf88P0DMB2 117 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 BPIFB3P59826 476 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 KLK9Q2XQG4 91 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 GSX1Q9H4S2 264 aaPredicted RBP11.77□□□□□ -0.53
CCT4-201ENST00000394440 KLK9Q9UKQ9 250 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 COX7A2P2O60397 106 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 NPPCP23582 126 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 AKR1C3P42330 323 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 TAS2R45P59539 299 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 C10orf113Q5VZT2 155 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 LURAP1LQ8IV03 231 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 MBD6Q96DN6 1003 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 SLC25A2Q9BXI2 301 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 DOK5Q9P104 306 aa11.77□□□□□ -0.53
CCT4-201ENST00000394440 YTHDF2Q9Y5A9 579 aaKnown RBP11.77□□□□□ -0.53
CCT4-201ENST00000394440 SOX21Q9Y651 276 aaPredicted RBP11.77□□□□□ -0.53
CCT4-201ENST00000394440 APCP25054 2843 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 IGKV1-17P01599 117 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 AKIRIN2Q53H80 203 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 KRTAP1-3Q8IUG1 177 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 PARLQ9H300 379 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 SDF2L1Q9HCN8 221 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 TMEM167BQ9NRX6 74 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 MOB4Q9Y3A3 225 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 ZFHX3Q15911 3703 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 ELOA3CA0A087WX78 387 aaPredicted RBP11.76□□□□□ -0.53
CCT4-201ENST00000394440 ATP6V0E1O15342 81 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 PDE6DO43924 150 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 AMY1AP04745 511 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 PNRC1Q12796 327 aaPredicted RBP11.76□□□□□ -0.53
CCT4-201ENST00000394440 Q5PR19 223 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
CCT4-201ENST00000394440 NOTCH2Q04721 2471 aa11.76□□□□□ -0.53
CCT4-201ENST00000394440 PRRC2AP48634 2157 aaKnown RBP11.75□□□□□ -0.53
CCT4-201ENST00000394440 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 RNF223E7ERA6 249 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 J3QLI3 93 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 CST9LP1Q5W188 147 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 TMEM219Q86XT9 240 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 FAM110DQ8TAY7 271 aaPredicted RBP11.75□□□□□ -0.53
CCT4-201ENST00000394440 UHRF2Q96PU4 802 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 SSX3Q99909 188 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 SMIM7Q9BQ49 75 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 SMCO4Q9NRQ5 59 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 ZNF355PQ9NSJ1 428 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 OR51G1Q8NGK1 321 aa11.75□□□□□ -0.53
CCT4-201ENST00000394440 RPUSD4Q96CM3 377 aaKnown RBP11.75□□□□□ -0.53
CCT4-201ENST00000394440 TUBA4BQ9H853 241 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms