RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 CEACAM3P40198 252 aa11.97□□□□□ -0.49
GPC3-202ENST00000394299 FAM3BP58499 235 aaPredicted RBP11.97□□□□□ -0.49
GPC3-202ENST00000394299 C10orf113Q5VZT2 155 aa11.97□□□□□ -0.49
GPC3-202ENST00000394299 C1QL4Q86Z23 238 aa11.97□□□□□ -0.49
GPC3-202ENST00000394299 MYO18BQ8IUG5 2567 aa11.97□□□□□ -0.49
GPC3-202ENST00000394299 TRAV20A0A0B4J274 112 aa11.97□□□□□ -0.49
GPC3-202ENST00000394299 OVOL3O00110 214 aa11.97□□□□□ -0.49
GPC3-202ENST00000394299 FXYD3Q14802 87 aa11.97□□□□□ -0.49
GPC3-202ENST00000394299 OR1B1Q8NGR6 318 aa11.97□□□□□ -0.49
GPC3-202ENST00000394299 NCBP2LA6PVI3 153 aaKnown RBP11.96□□□□□ -0.49
GPC3-202ENST00000394299 FAM120AOSQ5T036 256 aa11.96□□□□□ -0.49
GPC3-202ENST00000394299 PQLC2Q6ZP29 291 aa11.96□□□□□ -0.49
GPC3-202ENST00000394299 LINC00305Q7Z4B0 112 aa11.96□□□□□ -0.49
GPC3-202ENST00000394299 RNF5Q99942 180 aa11.96□□□□□ -0.49
GPC3-202ENST00000394299 A0A1W2PPQ1 181 aa11.96□□□□□ -0.5
GPC3-202ENST00000394299 K7EN84 100 aa11.96□□□□□ -0.5
GPC3-202ENST00000394299 TOX4O94842 621 aa11.96□□□□□ -0.5
GPC3-202ENST00000394299 LEMD1Q68G75 181 aa11.96□□□□□ -0.5
GPC3-202ENST00000394299 ZNF600Q6ZNG1 722 aa11.96□□□□□ -0.5
GPC3-202ENST00000394299 FRZBQ92765 325 aa11.96□□□□□ -0.5
GPC3-202ENST00000394299 TBX15Q96SF7 602 aa11.96□□□□□ -0.5
GPC3-202ENST00000394299 TMEM167BQ9NRX6 74 aa11.96□□□□□ -0.5
GPC3-202ENST00000394299 NDUFS6O75380 124 aaKnown RBP11.95□□□□□ -0.5
GPC3-202ENST00000394299 NDUFA6P56556 154 aa11.95□□□□□ -0.5
GPC3-202ENST00000394299 TAS2R45P59539 299 aa11.95□□□□□ -0.5
GPC3-202ENST00000394299 OR5I1Q13606 314 aa11.95□□□□□ -0.5
GPC3-202ENST00000394299 C1orf122Q6ZSJ8 110 aa11.95□□□□□ -0.5
GPC3-202ENST00000394299 TMEM116Q8NCL8 245 aa11.95□□□□□ -0.5
GPC3-202ENST00000394299 LINC00479Q96M42 142 aa11.95□□□□□ -0.5
GPC3-202ENST00000394299 TXNDC17Q9BRA2 123 aa11.95□□□□□ -0.5
GPC3-202ENST00000394299 C19orf24Q9BVV8 132 aa11.95□□□□□ -0.5
GPC3-202ENST00000394299 TRBV24-1A0A075B6N3 115 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 IGHV2-70DA0A0C4DH43 119 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 I3L2K1 104 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BKO60814 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BJP06899 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BOP23527 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BBP33778 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BDP58876 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BCP62807 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 UBE2L3P68036 154 aaKnown RBP11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST2H2BEQ16778 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.94□□□□□ -0.5
GPC3-202ENST00000394299 ASPHD1Q5U4P2 390 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 ETFRF1Q6IPR1 90 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 NPBQ8NG41 125 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BHQ93079 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BNQ99877 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 HIST1H2BMQ99879 126 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 DOPEY1Q5JWR5 2465 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 A0A0U1RQK1 487 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 TMEM8BA6NDV4 472 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 H3BTX0 84 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 NDUFA3O95167 84 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 NDPQ00604 133 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 C5orf64Q2M2E5 130 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 MRPL41Q8IXM3 137 aaKnown RBP11.94□□□□□ -0.5
GPC3-202ENST00000394299 AJUBAQ96IF1 538 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 OR5B12Q96R08 314 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 GSN-AS1Q9NRJ2 163 aa11.94□□□□□ -0.5
GPC3-202ENST00000394299 IGHV3OR16-10A0A075B7F0 116 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 AP4M1O00189 453 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 UBE2CO00762 179 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 FABP1P07148 127 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 TRGC1P0CF51 173 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 CX3CL1P78423 397 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 OR2T10Q8NGZ9 312 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 ANAPC16Q96DE5 110 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 PAXXQ9BUH6 204 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 MRPL32Q9BYC8 188 aaKnown RBP11.93□□□□□ -0.5
GPC3-202ENST00000394299 SELENOTP62341 195 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 TIGITQ495A1 244 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 OR1L4Q8NGR5 311 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 NRGNQ92686 78 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 C11orf52Q96A22 123 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 SFRP2Q96HF1 295 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 BBC3Q96PG8 261 aaPredicted RBP11.93□□□□□ -0.5
GPC3-202ENST00000394299 OR51M1Q9H341 326 aa11.93□□□□□ -0.5
GPC3-202ENST00000394299 ZNF462Q96JM2 2506 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 HELTA6NFD8 242 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 K7EIM0 57 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 SLC17A3O00476 420 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 PSG1P11464 419 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 GFI1BQ5VTD9 330 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 KIR3DL3Q8N743 410 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 BLNKQ8WV28 456 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 PFDN5Q99471 154 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 TRGV9Q99603 122 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 PHOX2AO14813 284 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 IGLC1P0CG04 106 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 FXYD5Q96DB9 178 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 PYGO2Q9BRQ0 406 aa11.92□□□□□ -0.5
GPC3-202ENST00000394299 S100PP25815 95 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 BPIFB3P59826 476 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 RANP62826 216 aaKnown RBP11.91□□□□□ -0.5
GPC3-202ENST00000394299 PIP4P2Q8N4L2 257 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 C22orf15Q8WYQ4 148 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 ABCA2Q9BZC7 2435 aa11.91□□□□□ -0.5
GPC3-202ENST00000394299 SH2D7A6NKC9 451 aaPredicted RBP11.91□□□□□ -0.5
GPC3-202ENST00000394299 CORTO00230 105 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms