RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 DNAJC4Q9NNZ3 241 aa11.33□□□□□ -0.6
RNF41-202ENST00000394013 CLDN34H7C241 214 aa11.33□□□□□ -0.6
RNF41-202ENST00000394013 IGHV3-23P01764 117 aa11.33□□□□□ -0.6
RNF41-202ENST00000394013 THAP8Q8NA92 274 aa11.33□□□□□ -0.6
RNF41-202ENST00000394013 OR1P1Q8NH06 330 aa11.33□□□□□ -0.6
RNF41-202ENST00000394013 TECRQ9NZ01 308 aaKnown RBP11.33□□□□□ -0.6
RNF41-202ENST00000394013 PDE6DO43924 150 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 TRGC2P03986 189 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 SAA4P35542 130 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 CEACAM3P40198 252 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 ATP5IP56385 69 aaPredicted RBP11.32□□□□□ -0.6
RNF41-202ENST00000394013 RAB5BP61020 215 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 SRSF1Q07955 248 aaKnown RBP eCLIP11.32□□□□□ -0.6
RNF41-202ENST00000394013 C5orf64Q2M2E5 130 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 BCL6BQ8N143 479 aaPredicted RBP11.32□□□□□ -0.6
RNF41-202ENST00000394013 OCC1Q8TAD7 63 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 PERPQ96FX8 193 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 A0A0U1RQK1 487 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 K7EN84 100 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 C8orf88P0DMB2 117 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 MAS1LP35410 378 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 FAM3BP58499 235 aaPredicted RBP11.32□□□□□ -0.6
RNF41-202ENST00000394013 SUMO1P63165 101 aaKnown RBP11.32□□□□□ -0.6
RNF41-202ENST00000394013 CX3CL1P78423 397 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 OR5I1Q13606 314 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 TIGITQ495A1 244 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 C10orf113Q5VZT2 155 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 PVRIGQ6DKI7 326 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 LINC00305Q7Z4B0 112 aa11.32□□□□□ -0.6
RNF41-202ENST00000394013 IGHV4-30-2A0A087WSY4 118 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 B4DEV8 164 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 I3L2K1 104 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 UBE2L3P68036 154 aaKnown RBP11.31□□□□□ -0.6
RNF41-202ENST00000394013 BRD3OSQ6XYD6 125 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 K7EIM0 57 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 NDUFA3O95167 84 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 NHLRC2Q8NBF2 726 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 NPBQ8NG41 125 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 FAM210BQ96KR6 192 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 SGK494Q96LW2 274 aa11.31□□□□□ -0.6
RNF41-202ENST00000394013 LINC01548A6NM66 108 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 H7BYZ3 331 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 CLN5O75503 358 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 OR2T10Q8NGZ9 312 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 NANPQ8TBE9 248 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 BLNKQ8WV28 456 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 HSPB9Q9BQS6 159 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 ZNF469Q96JG9 3925 aaPredicted RBP11.3□□□□□ -0.6
RNF41-202ENST00000394013 CHD6Q8TD26 2715 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 PFN1P07737 140 aaKnown RBP11.3□□□□□ -0.6
RNF41-202ENST00000394013 TMEM11P17152 192 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 COL8A1P27658 744 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 GALR1P47211 349 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 ATP5J2P56134 94 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 C1QL4Q86Z23 238 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 TMEM116Q8NCL8 245 aa11.3□□□□□ -0.6
RNF41-202ENST00000394013 A0A1W2PPQ1 181 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 IGLC1P0CG04 106 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 PSG1P11464 419 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 GNG5P63218 68 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 C1orf122Q6ZSJ8 110 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 Q8N6K4 173 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 BIN3Q9NQY0 253 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 TRAV34A0A0B4J273 112 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 CENPVL3A0A0U1RRI6 287 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 CXorf65A6NEN9 183 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 F6UZH7 168 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 SLC17A3O00476 420 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 IGKV1-17P01599 117 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 LYZP61626 148 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 FABP9Q0Z7S8 132 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 TMEM219Q86XT9 240 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 ZNF843Q8N446 348 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 FAM168AQ92567 244 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 MALSU1Q96EH3 234 aa11.29□□□□□ -0.6
RNF41-202ENST00000394013 KLF2Q9Y5W3 355 aaPredicted RBP11.29□□□□□ -0.6
RNF41-202ENST00000394013 EGR2P11161 476 aaPredicted RBP11.28□□□□□ -0.6
RNF41-202ENST00000394013 PDLIM4P50479 330 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 FRZBQ92765 325 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 FXYD5Q96DB9 178 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 FANCD2OSQ96PS1 177 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 RNF5Q99942 180 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 PAXXQ9BUH6 204 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 IGHV3OR16-8A0A075B7F1 116 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 TSPAN9O75954 239 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 RANP62826 216 aaKnown RBP11.28□□□□□ -0.6
RNF41-202ENST00000394013 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 Q71RC1 249 aaPredicted RBP11.28□□□□□ -0.6
RNF41-202ENST00000394013 ARPC1AQ92747 370 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 TMEM242Q9NWH2 141 aa11.28□□□□□ -0.6
RNF41-202ENST00000394013 UBE2E1P51965 193 aa11.27□□□□□ -0.61
RNF41-202ENST00000394013 CENPWQ5EE01 88 aa11.27□□□□□ -0.61
RNF41-202ENST00000394013 GFI1BQ5VTD9 330 aa11.27□□□□□ -0.61
RNF41-202ENST00000394013 Q8N9W7 124 aa11.27□□□□□ -0.61
RNF41-202ENST00000394013 MAPK1IP1LQ8NDC0 245 aa11.27□□□□□ -0.61
RNF41-202ENST00000394013 RBM14Q96PK6 669 aaKnown RBP11.27□□□□□ -0.61
RNF41-202ENST00000394013 TRGV9Q99603 122 aa11.27□□□□□ -0.61
RNF41-202ENST00000394013 OR51M1Q9H341 326 aa11.27□□□□□ -0.61
RNF41-202ENST00000394013 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms