RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 MYCNOSP40205 109 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 LYPD2Q6UXB3 125 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 NUDT10Q8NFP7 164 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 TSKUQ8WUA8 353 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 NUDT11Q96G61 164 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 SAP30LQ9HAJ7 183 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 A0A1W2PPI3 338 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 RPLP1P05386 114 aaKnown RBP15.17■□□□□ 0.02
CBX1-202ENST00000393408 CTRLP40313 264 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 TBR1Q16650 682 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 TPSG1Q9NRR2 321 aa15.17■□□□□ 0.02
CBX1-202ENST00000393408 CUL9Q8IWT3 2517 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 NDUFB3O43676 98 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 MRGPRG-AS1Q2M3A8 158 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 LINC00305Q7Z4B0 112 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 NUP35Q8NFH5 326 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 C18orf32Q8TCD1 76 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 TMEM68Q96MH6 324 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 C7orf69Q9H7B7 122 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 EP300Q09472 2414 aaPredicted RBP15.16■□□□□ 0.02
CBX1-202ENST00000393408 C16orf97H3BN30 126 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 SLC25A17O43808 307 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 ZNF137PP52743 207 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 MFAP2P55001 183 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 BSPH1Q075Z2 132 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 GDF5OSQ5U4N7 250 aa15.16■□□□□ 0.02
CBX1-202ENST00000393408 MRPL27Q9P0M9 148 aaKnown RBP15.16■□□□□ 0.02
CBX1-202ENST00000393408 A0A0G2JNJ9 132 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 PLAUP00749 431 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 C3orf79P0CE67 100 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 PRRX1P54821 245 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 DLX6P56179 175 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 GNG5P63218 68 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 VMA21Q3ZAQ7 101 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 LRRC10Q5BKY1 277 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 SPACA3Q8IXA5 215 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 RITA1Q96K30 269 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 Q9UFV3 132 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 C22orf46C9J442 243 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 FOSL1P15407 271 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 ZNF25P17030 456 aaPredicted RBP15.15■□□□□ 0.02
CBX1-202ENST00000393408 ZNF841Q6ZN19 808 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 FAM19A2Q8N3H0 131 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 CTSZQ9UBR2 303 aa15.15■□□□□ 0.02
CBX1-202ENST00000393408 THBDP07204 575 aa15.14■□□□□ 0.01
CBX1-202ENST00000393408 LOXP28300 417 aaPredicted RBP15.14■□□□□ 0.01
CBX1-202ENST00000393408 RUSC1-AS1Q66K80 236 aa15.14■□□□□ 0.01
CBX1-202ENST00000393408 CCL17Q92583 94 aa15.14■□□□□ 0.01
CBX1-202ENST00000393408 CHRDL1Q9BU40 450 aa15.14■□□□□ 0.01
CBX1-202ENST00000393408 CNOT1A5YKK6 2376 aaKnown RBP15.14■□□□□ 0.01
CBX1-202ENST00000393408 CRYGCP07315 174 aa15.14■□□□□ 0.01
CBX1-202ENST00000393408 RP1L1Q8IWN7 2480 aaPredicted RBP15.13■□□□□ 0.01
CBX1-202ENST00000393408 IGLC7A0M8Q6 106 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 MOSP00540 346 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 MC5RP33032 325 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 SPATA45Q537H7 98 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 PVRIGQ6DKI7 326 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 PRR27Q6MZM9 219 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 C19orf35Q6ZS72 473 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 STXBP6Q8NFX7 210 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 PERPQ96FX8 193 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 TNFRSF19Q9NS68 423 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 EPDR1Q9UM22 224 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 A6NNC1 897 aa15.13■□□□□ 0.01
CBX1-202ENST00000393408 CORTO00230 105 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 HIST1H1EP10412 219 aaKnown RBP15.12■□□□□ 0.01
CBX1-202ENST00000393408 ORM2P19652 201 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 ETFRF1Q6IPR1 90 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 KLF12Q9Y4X4 402 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 PLXNB1O43157 2135 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 SLC25A5P05141 298 aaKnown RBP15.12■□□□□ 0.01
CBX1-202ENST00000393408 NTF3P20783 257 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 UBE2G1P62253 170 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 KLF5Q13887 457 aaPredicted RBP15.12■□□□□ 0.01
CBX1-202ENST00000393408 TMEM155Q4W5P6 130 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 OR1B1Q8NGR6 318 aa15.12■□□□□ 0.01
CBX1-202ENST00000393408 HIGD1CA8MV81 97 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 OR2J3O76001 311 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 LGALS7P47929 136 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 HCP5Q6MZN7 132 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 ASCL5Q7RTU5 278 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 BLNKQ8WV28 456 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 TRGV9Q99603 122 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 TMEM208Q9BTX3 173 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 DMXL1Q9Y485 3027 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 VWC2LB2RUY7 222 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 CASP6P55212 293 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 TNXAQ16473 311 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 BORCS7Q96B45 105 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 SMIM12Q96EX1 92 aa15.11■□□□□ 0.01
CBX1-202ENST00000393408 SMG1Q96Q15 3661 aaKnown RBP15.1■□□□□ 0.01
CBX1-202ENST00000393408 PGPA6NDG6 321 aa15.1■□□□□ 0.01
CBX1-202ENST00000393408 ENSAO43768 121 aaKnown RBP15.1■□□□□ 0.01
CBX1-202ENST00000393408 IGHV1-8P0DP01 117 aa15.1■□□□□ 0.01
CBX1-202ENST00000393408 ALKBH7Q9BT30 221 aaPredicted RBP15.1■□□□□ 0.01
CBX1-202ENST00000393408 LPAR2Q9HBW0 351 aa15.1■□□□□ 0.01
CBX1-202ENST00000393408 KAAG1Q9UBP8 84 aa15.1■□□□□ 0.01
CBX1-202ENST00000393408 IGHV3-72A0A0B4J1Y9 119 aa15.09■□□□□ 0.01
CBX1-202ENST00000393408 A0A1B0GXF2 115 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms