RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 GGTLC1Q9BX51 225 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 RALYQ9UKM9 306 aaKnown RBP8.66□□□□□ -1.02
CALD1-203ENST00000393118 TIMP3P35625 211 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 HILPDAQ9Y5L2 63 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 ANKRD11Q6UB99 2663 aaPredicted RBP8.66□□□□□ -1.02
CALD1-203ENST00000393118 IGLV1-44P01699 117 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 MLANAQ16655 118 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 OR4C13Q8NGP0 309 aa8.66□□□□□ -1.02
CALD1-203ENST00000393118 SEPSECSQ9HD40 501 aaKnown RBP8.66□□□□□ -1.02
CALD1-203ENST00000393118 A0A0G2JNJ9 132 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 NUPR1O60356 82 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 GFRA3O60609 400 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 MAS1LP35410 378 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 MFAP2P55001 183 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
CALD1-203ENST00000393118 MMD2Q8IY49 270 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 OR9G1Q8NH87 305 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 Q9UFV3 132 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 IGHV1-69-2A0A0G2JMI3 117 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 C15orf65H3BRN8 121 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.02
CALD1-203ENST00000393118 MOSP00540 346 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 TMEM186Q96B77 213 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 MGST2Q99735 147 aa8.65□□□□□ -1.02
CALD1-203ENST00000393118 CHEK1O14757 476 aa8.65□□□□□ -1.03
CALD1-203ENST00000393118 MMP23AO75900 390 aa8.65□□□□□ -1.03
CALD1-203ENST00000393118 OR1N2Q8NGR9 330 aa8.65□□□□□ -1.03
CALD1-203ENST00000393118 RPUSD1Q9UJJ7 312 aaKnown RBP8.65□□□□□ -1.03
CALD1-203ENST00000393118 FBXL7Q9UJT9 491 aa8.65□□□□□ -1.03
CALD1-203ENST00000393118 LINC00312Q9Y6C7 94 aa8.65□□□□□ -1.03
CALD1-203ENST00000393118 CACNA1AO00555 2505 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 A6NDN8 102 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 H3BUT2 72 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 HTR1DP28221 377 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 EFNB3Q15768 340 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 MSMPQ1L6U9 139 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 PRR30Q53SZ7 412 aaPredicted RBP8.64□□□□□ -1.03
CALD1-203ENST00000393118 PRR31Q5SQ13 230 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 ODF3L1Q8IXM7 274 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 NEUROG1Q92886 237 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 C5orf30Q96GV9 206 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 PAXXQ9BUH6 204 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 CSTL1Q9H114 145 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 PLXNB1O43157 2135 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 RPL27AP46776 148 aaKnown RBP8.64□□□□□ -1.03
CALD1-203ENST00000393118 LHFPL4Q7Z7J7 247 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 PDPNQ86YL7 162 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 OR1L4Q8NGR5 311 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 GAFA1Q96PS6 74 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 DLL1O00548 723 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 ASCL5Q7RTU5 278 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 AGMATQ9BSE5 352 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 C11orf1Q9H5F2 150 aa8.64□□□□□ -1.03
CALD1-203ENST00000393118 OR4C46A6NHA9 309 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 UPK2O00526 184 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 OR5AL1P0C617 328 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 DLX1P56177 255 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 ARF6P62330 175 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 CENPWQ5EE01 88 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.63□□□□□ -1.03
CALD1-203ENST00000393118 GNB4Q9HAV0 340 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 CDC42EP3Q9UKI2 254 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 TM4SF5O14894 197 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 FOXH1O75593 365 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 C3orf79P0CE67 100 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 C8orf88P0DMB2 117 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 IGLC2P0DOY2 106 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 IGLC3P0DOY3 106 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 HIST1H1EP10412 219 aaKnown RBP8.63□□□□□ -1.03
CALD1-203ENST00000393118 TM4SF20Q53R12 229 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 SEM1Q6ZVN7 128 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 MUC15Q8N387 334 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 VENTXO95231 258 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 SSBP3Q9BWW4 388 aaPredicted RBP8.63□□□□□ -1.03
CALD1-203ENST00000393118 MUC21A0A0G2JKD1 596 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 MUC21A0A140T8X8 626 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 ARL3P36405 182 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 CA7P43166 264 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 ADIPOQQ15848 244 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 MUC21Q5SSG8 566 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 SPACA3Q8IXA5 215 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 OCC1Q8TAD7 63 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 OSR1Q8TAX0 266 aaPredicted RBP8.63□□□□□ -1.03
CALD1-203ENST00000393118 TNFRSF19Q9NS68 423 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 CLEC5AQ9NY25 188 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 ELOVL5Q9NYP7 299 aa8.63□□□□□ -1.03
CALD1-203ENST00000393118 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.62□□□□□ -1.03
CALD1-203ENST00000393118 ZNF137PP52743 207 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 LYPD2Q6UXB3 125 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 C19orf35Q6ZS72 473 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 KCNS1Q96KK3 526 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 F2RL2O00254 374 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 ZNF324O75467 553 aaPredicted RBP8.62□□□□□ -1.03
CALD1-203ENST00000393118 SCGB2A1O75556 95 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 PRB4P10163 310 aaPredicted RBP8.62□□□□□ -1.03
CALD1-203ENST00000393118 ZNF788Q6ZQV5 615 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 ZNF295-AS1Q8N0V1 137 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 RAB1CQ92928 201 aa8.62□□□□□ -1.03
CALD1-203ENST00000393118 TNFRSF14Q92956 283 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms