RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 RCC1LQ96I51 464 aaKnown RBP10.63□□□□□ -0.71
PTN-202ENST00000393083 ZNF702PQ9H963 129 aa10.63□□□□□ -0.71
PTN-202ENST00000393083 MRPL36Q9P0J6 103 aaKnown RBP10.63□□□□□ -0.71
PTN-202ENST00000393083 A0A1B0GUS0 222 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 CLPSL1A2RUU4 121 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 CYB5BO43169 146 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 M6PRP20645 277 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 S100A1P23297 94 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 RPL29P47914 159 aaKnown RBP10.62□□□□□ -0.71
PTN-202ENST00000393083 ZNF726P1Q15940 193 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 FAM122CQ6P4D5 195 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 THAP8Q8NA92 274 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 OR10G4Q8NGN3 311 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 OR10G9Q8NGN4 311 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 OR10G7Q8NGN6 311 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 FAM110DQ8TAY7 271 aaPredicted RBP10.62□□□□□ -0.71
PTN-202ENST00000393083 SLC25A22Q9H936 323 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 SLC45A2Q9UMX9 530 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 ANK2Q01484 3957 aa10.62□□□□□ -0.71
PTN-202ENST00000393083 STAB1Q9NY15 2570 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 TENM1Q9UKZ4 2725 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 IGLV11-55A0A075B6I3 123 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 RAB19A4D1S5 217 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 I3L2K1 104 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 YIF1AO95070 293 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 HBE1P02100 147 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 C12orf54Q6X4T0 127 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 CYP2G1PQ6ZSU1 146 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 SSX7Q7RTT5 188 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 EIF4E3Q8N5X7 224 aaKnown RBP10.61□□□□□ -0.71
PTN-202ENST00000393083 BPIFCQ8NFQ6 507 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 OR5T1Q8NG75 326 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 SFT2D1Q8WV19 159 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 SLC39A9Q9NUM3 307 aa10.61□□□□□ -0.71
PTN-202ENST00000393083 CTXND1A0A1B0GTU2 59 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 MAP1LC3B2A6NCE7 125 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 ZFP92A6NM28 416 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 LINC01548A6NM66 108 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 I3L521 148 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 K7EIM0 57 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 PROK1P58294 105 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 PRR20EP86478 221 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 PRR20CP86479 221 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 PRR20DP86480 221 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 PRR20BP86481 221 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 PRR20AP86496 221 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 SPSB3Q6PJ21 355 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 LCN15Q6UWW0 184 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 RPP25LQ8N5L8 163 aaKnown RBP10.6□□□□□ -0.71
PTN-202ENST00000393083 COMMD1Q8N668 190 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 TMEM68Q96MH6 324 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 FANCD2OSQ96PS1 177 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 ACTR3CQ9C0K3 210 aaPredicted RBP10.6□□□□□ -0.71
PTN-202ENST00000393083 PRSS22Q9GZN4 317 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 MAP1LC3BQ9GZQ8 125 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 RNF114Q9Y508 228 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 IGKV1D-37A0A075B6S9 117 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 TCRBV4S1A1TA0A5B7 111 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 G3V318 75 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 EIF3GO75821 320 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTN-202ENST00000393083 CDC34P49427 236 aaPredicted RBP10.6□□□□□ -0.71
PTN-202ENST00000393083 CRIP2P52943 208 aaPredicted RBP10.6□□□□□ -0.71
PTN-202ENST00000393083 TMEM116Q8NCL8 245 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 MBD3L1Q8WWY6 194 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 SERTAD4Q9NUC0 356 aa10.6□□□□□ -0.71
PTN-202ENST00000393083 ANKRD34BA5PLL1 514 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 OR2J3O76001 311 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 LINC00869P0C866 280 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 GATA2P23769 480 aaPredicted RBP10.59□□□□□ -0.71
PTN-202ENST00000393083 FGF8P55075 233 aaPredicted RBP10.59□□□□□ -0.71
PTN-202ENST00000393083 AKIRIN2Q53H80 203 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 TOR2AQ5JU69 321 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 UQCC3Q6UW78 93 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 SLC35E3Q7Z769 313 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 TRGV9Q99603 122 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 ZNF747Q9BV97 191 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 THYN1Q9P016 225 aa10.59□□□□□ -0.71
PTN-202ENST00000393083 TRAV1-1A0A0B4J248 108 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 TRAV41A0A0B4J266 112 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 A0A1W2PPV4 95 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 SEC14L6B5MCN3 397 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 HMGB3O15347 200 aaKnown RBP10.58□□□□□ -0.72
PTN-202ENST00000393083 IGHG2P01859 326 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 HIST1H1BP16401 226 aaKnown RBP10.58□□□□□ -0.72
PTN-202ENST00000393083 KRTAP10-3P60369 221 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 CCL20P78556 96 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 DEFA5Q01523 94 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 ZNF90Q03938 601 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 C3orf56Q8N813 242 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 OR4X1Q8NH49 305 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 RAB24Q969Q5 203 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 TMEM231Q9H6L2 316 aa10.58□□□□□ -0.72
PTN-202ENST00000393083 NDUFB8O95169 186 aa10.57□□□□□ -0.72
PTN-202ENST00000393083 SELENOTP62341 195 aa10.57□□□□□ -0.72
PTN-202ENST00000393083 SRSF3P84103 164 aaKnown RBP10.57□□□□□ -0.72
PTN-202ENST00000393083 C19orf54Q5BKX5 351 aa10.57□□□□□ -0.72
PTN-202ENST00000393083 FAM210AQ96ND0 272 aa10.57□□□□□ -0.72
PTN-202ENST00000393083 TREM1Q9NP99 234 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms