RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 IGKV1D-43A0A0B4J1Z2 117 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 H7C2G1 150 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 K7EN84 100 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 CEACAM4O75871 244 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 TWIST1Q15672 202 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 MBNL2Q5VZF2 373 aaKnown RBP6.33□□□□□ -1.4
VTI1A-201ENST00000393077 PDPNQ86YL7 162 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 OR4C13Q8NGP0 309 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 SNRNP40Q96DI7 357 aaKnown RBP6.33□□□□□ -1.4
VTI1A-201ENST00000393077 TIMD4Q96H15 378 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 OXGR1Q96P68 337 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 SLC25A33Q9BSK2 321 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 TMEM74BQ9NUR3 256 aa6.33□□□□□ -1.4
VTI1A-201ENST00000393077 SPINT2O43291 252 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 ZIC3O60481 467 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 FCGR3BO75015 233 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 IL11P20809 199 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 NDUFV3P56181 108 aaKnown RBP6.32□□□□□ -1.4
VTI1A-201ENST00000393077 C6orf15Q6UXA7 325 aaPredicted RBP6.32□□□□□ -1.4
VTI1A-201ENST00000393077 SLC25A45Q8N413 288 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 OR10J6PQ8NGY7 276 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 PILRAQ9UKJ1 303 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 RALGAPA1Q6GYQ0 2036 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 RPS19BP1Q86WX3 136 aaKnown RBP6.32□□□□□ -1.4
VTI1A-201ENST00000393077 GCSAMQ8N6F7 178 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 AAMDCQ9H7C9 122 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 EPDR1Q9UM22 224 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 LAMA2P24043 3122 aaKnown RBP6.32□□□□□ -1.4
VTI1A-201ENST00000393077 FRG2CA6NGY1 282 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 IGLL5B9A064 214 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 SP1P08047 785 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 FLYWCH2Q96CP2 140 aaKnown RBP6.32□□□□□ -1.4
VTI1A-201ENST00000393077 C1orf43Q9BWL3 253 aa6.32□□□□□ -1.4
VTI1A-201ENST00000393077 SPTAN1Q13813 2472 aaKnown RBP6.32□□□□□ -1.4
VTI1A-201ENST00000393077 A0A0J9YW62 118 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 J3KT08 172 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 PI4KAP42356 2102 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 PSG7Q13046 419 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 TMEM155Q4W5P6 130 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 RBPMS2Q6ZRY4 209 aaKnown RBP6.31□□□□□ -1.4
VTI1A-201ENST00000393077 MIR17HGQ75NE6 70 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 MYOZ3Q8TDC0 251 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 TM4SF19Q96DZ7 209 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 FZR1Q9UM11 496 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 CCDC179H3BU77 68 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 C8orf88P0DMB2 117 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 CCL4P13236 92 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 SSR4P51571 173 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 FXYD2P54710 66 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 KLF5Q13887 457 aaPredicted RBP6.31□□□□□ -1.4
VTI1A-201ENST00000393077 OR1L4Q8NGR5 311 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 ABHD17AQ96GS6 310 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 RPP21Q9H633 154 aaKnown RBP6.31□□□□□ -1.4
VTI1A-201ENST00000393077 ANAPC1Q9H1A4 1944 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 HBDP02042 147 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 CKS2P33552 79 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 NTF4P34130 210 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 TBC1D28Q2M2D7 210 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 PCP2Q8IVA1 136 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 RASL11BQ9BPW5 248 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 PAXXQ9BUH6 204 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 OCIAD1Q9NX40 245 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 TRAV2A0A0B4J234 112 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 MS4A18H0YCH9 400 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 HSPE1P61604 102 aaKnown RBP6.31□□□□□ -1.4
VTI1A-201ENST00000393077 EFNB3Q15768 340 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 MS4A18Q3C1V0 323 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 TMEM54Q969K7 222 aa6.31□□□□□ -1.4
VTI1A-201ENST00000393077 DENND4CQ5VZ89 1909 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 ZFHX2Q9C0A1 2572 aaPredicted RBP6.3□□□□□ -1.4
VTI1A-201ENST00000393077 IGKV1-5P01602 117 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 CD24P25063 80 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 ZNF658BQ4V348 819 aaPredicted RBP6.3□□□□□ -1.4
VTI1A-201ENST00000393077 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.3□□□□□ -1.4
VTI1A-201ENST00000393077 GTSCR1Q86UQ5 136 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 SHISA5Q8N114 240 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 S1PR3Q99500 378 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 ONECUT1Q9UBC0 465 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 LOXL2Q9Y4K0 774 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 DNAJC13O75165 2243 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 A0A1B0GUT8 65 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 A0A1W2PR77 199 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 SMIM27A0A1W2PRY6 76 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 AREGP15514 252 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 INSL3P51460 131 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 XGP55808 180 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 RSPO4Q2I0M5 234 aaPredicted RBP6.3□□□□□ -1.4
VTI1A-201ENST00000393077 LYPD6Q86Y78 171 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 ABHD12Q8N2K0 398 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 RPRMLQ8N4K4 120 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 FOXC2Q99958 501 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 C1RLQ9NZP8 487 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 MPC1Q9Y5U8 109 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 CUL9Q8IWT3 2517 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 OR2H2O95918 312 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 HERVK_113P61574 105 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 KLF17Q5JT82 389 aaPredicted RBP6.3□□□□□ -1.4
VTI1A-201ENST00000393077 LINC01545Q5VT33 79 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 DRAM1Q8N682 238 aa6.3□□□□□ -1.4
VTI1A-201ENST00000393077 GTSF1Q8WW33 167 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms