RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CD300CQ08708 224 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 EGR4Q05215 589 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 A0A1W2PQF6 199 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 TGFAP01135 160 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 RMI2Q96E14 147 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 A0A1W2PRE2 83 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 FOXA2Q9Y261 457 aaPredicted RBP12.42□□□□□ -0.42
CCDC50-201ENST00000392455 CENPVL1A0A0U1RR11 272 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 VSIG10L2P0DP72 767 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 C6orf226Q5I0X4 101 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 FAM90A2PQ658T7 463 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 ZNF501Q96CX3 271 aaPredicted RBP12.42□□□□□ -0.42
CCDC50-201ENST00000392455 IGKV1D-42A0A075B6H8 117 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 TMEM187Q14656 261 aa12.42□□□□□ -0.42
CCDC50-201ENST00000392455 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
CCDC50-201ENST00000392455 SPINK8P0C7L1 97 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 HTN3P15516 51 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 PPP1R3EQ9H7J1 279 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 MUC4Q99102 2169 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 DENND4AQ7Z401 1863 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 MDKP21741 143 aaPredicted RBP12.41□□□□□ -0.42
CCDC50-201ENST00000392455 KLF14Q8TD94 323 aaPredicted RBP12.41□□□□□ -0.42
CCDC50-201ENST00000392455 EFNB1P98172 346 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 ZNF826PQ6ZT77 177 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 TMEM144Q7Z5S9 345 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 LY75O60449 1722 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 ASPHD2Q6ICH7 369 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 RFLNBQ8N5W9 214 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 NANOS3P60323 173 aaKnown RBP12.41□□□□□ -0.42
CCDC50-201ENST00000392455 FUT5Q11128 374 aa12.41□□□□□ -0.42
CCDC50-201ENST00000392455 KLF17Q5JT82 389 aaPredicted RBP12.4□□□□□ -0.42
CCDC50-201ENST00000392455 LINC00312Q9Y6C7 94 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 C1QAP02745 245 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 IFITM3Q01628 133 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 SBF2Q86WG5 1849 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 C1QL1O75973 258 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 GAGE2AQ6NT46 116 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 TNFRSF14Q92956 283 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 CREBBPQ92793 2442 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 TRAV14DV4A0A0A6YYC5 116 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 A0A0G2JMM0 328 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 A0A1W2PPB8 328 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 KIR3DP1A8MWS1 328 aa12.4□□□□□ -0.42
CCDC50-201ENST00000392455 COLQQ9Y215 455 aaPredicted RBP12.4□□□□□ -0.43
CCDC50-201ENST00000392455 DSCR9P59020 149 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 CGAP01215 116 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 COL24A1Q17RW2 1714 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 TAF1LQ8IZX4 1826 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 SLC25A47Q6Q0C1 308 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 SFTA2Q6UW10 78 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 TSKUQ8WUA8 353 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 NEUROG3Q9Y4Z2 214 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 MMP23AO75900 390 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 CCL1P22362 96 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 NBR2O15453 112 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 LHX2P50458 406 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 Q6ZT83 130 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 RPRMLQ8N4K4 120 aa12.39□□□□□ -0.43
CCDC50-201ENST00000392455 GTF3AQ92664 365 aaKnown RBP12.39□□□□□ -0.43
CCDC50-201ENST00000392455 SLC25A39Q9BZJ4 359 aaPredicted RBP12.39□□□□□ -0.43
CCDC50-201ENST00000392455 IFITM1P13164 125 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 IL17RELQ6ZVW7 336 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 WFDC6Q9BQY6 131 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 EFEMP2O95967 443 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 ZNF124Q15973 351 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 SPSB3Q6PJ21 355 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 LEAP2Q969E1 77 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 IGKV3D-20A0A0C4DH25 116 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 LTBP4Q8N2S1 1624 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 SERF1AO75920 110 aa12.38□□□□□ -0.43
CCDC50-201ENST00000392455 IGKV1D-33P01593 117 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 IGKV1-33P01594 117 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 IGHG3P01860 377 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 C19orf48Q6RUI8 117 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 NKAPP1Q8N9T2 125 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 FDCSPQ8NFU4 85 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 IGHV3OR16-10A0A075B7F0 116 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 TCRBV4S1A1TA0A5B7 111 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 SMAD7O15105 426 aaKnown RBP12.37□□□□□ -0.43
CCDC50-201ENST00000392455 TNFSF13O75888 250 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 UMODP07911 640 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 SIGLEC15Q6ZMC9 328 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
CCDC50-201ENST00000392455 RPUSD1Q9UJJ7 312 aaKnown RBP12.37□□□□□ -0.43
CCDC50-201ENST00000392455 RNF125Q96EQ8 232 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 SCO2A0A1W2PP80 73 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
CCDC50-201ENST00000392455 UCP1P25874 307 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 ACP7Q6ZNF0 438 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 LDLRAD4O15165 306 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 LINC00477Q96M19 166 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.36□□□□□ -0.43
CCDC50-201ENST00000392455 C1QL4Q86Z23 238 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 SRSF2Q01130 221 aaKnown RBP12.36□□□□□ -0.43
CCDC50-201ENST00000392455 FAM19A2Q8N3H0 131 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 TIMM21Q9BVV7 248 aa12.36□□□□□ -0.43
CCDC50-201ENST00000392455 TRBV5-7A0A0A0MS05 114 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 TRAV41A0A0B4J266 112 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 IGKV1-8A0A0C4DH67 115 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms