RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 TLNRD1Q9H1K6 362 aa-0.08□□□□□ -2.42
SNORA40.3-201ENST00000390964 TMEM56-RWDD3S4R434 201 aa-0.08□□□□□ -2.42
SNORA40.3-201ENST00000390964 SCN10AQ9Y5Y9 1956 aa-0.08□□□□□ -2.42
SNORA40.3-201ENST00000390964 ASH1LQ9NR48 2969 aaKnown RBP-0.09□□□□□ -2.42
SNORA40.3-201ENST00000390964 PSMD12O00232 456 aaPredicted RBP-0.09□□□□□ -2.42
SNORA40.3-201ENST00000390964 HIST1H1TP22492 207 aaPredicted RBP-0.09□□□□□ -2.42
SNORA40.3-201ENST00000390964 TMEM86BQ8N661 226 aa-0.09□□□□□ -2.42
SNORA40.3-201ENST00000390964 OR51V1Q9H2C8 321 aa-0.09□□□□□ -2.42
SNORA40.3-201ENST00000390964 EPDR1Q9UM22 224 aa-0.09□□□□□ -2.42
SNORA40.3-201ENST00000390964 V9GYY5 206 aaPredicted RBP-0.09□□□□□ -2.42
SNORA40.3-201ENST00000390964 C7orf71A4D174 169 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 OR2J2O76002 312 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 SPINK7P58062 85 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 PSME3P61289 254 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 HIST3H3Q16695 136 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 ESRGQ1W209 222 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 HIST2H3PS2Q5TEC6 136 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 KRTAP26-1Q6PEX3 210 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 EXOC3-AS1Q8N2X6 119 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 LINC00301Q8NCQ3 95 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 C20orf27Q9GZN8 174 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 DCSTAMPQ9H295 470 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 C14orf132Q9NPU4 83 aa-0.1□□□□□ -2.43
SNORA40.3-201ENST00000390964 TLCD2A6NGC4 264 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 K7EIL1 84 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 NUPR1O60356 82 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 OR4E1P0C645 316 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 CD79AP11912 226 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 S100A4P26447 101 aaKnown RBP-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 YPEL3P61236 119 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 TMED1Q13445 227 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 LINC01554Q52M75 96 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 BRMS1LQ5PSV4 323 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 ANKRD29Q8N6D5 301 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 OR52R1Q8NGF1 315 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 TSKUQ8WUA8 353 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 TSPAN32Q96QS1 320 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 CHCHD2Q9Y6H1 151 aaPredicted RBP-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 NEO1Q92859 1461 aa-0.11□□□□□ -2.43
SNORA40.3-201ENST00000390964 IGHV1-58A0A0C4DH39 117 aa-0.12□□□□□ -2.43
SNORA40.3-201ENST00000390964 KLF7O75840 302 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.3-201ENST00000390964 RPL5P46777 297 aaKnown RBP-0.12□□□□□ -2.43
SNORA40.3-201ENST00000390964 C6orf62Q9GZU0 229 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.3-201ENST00000390964 MAP3K5Q99683 1374 aa-0.12□□□□□ -2.43
SNORA40.3-201ENST00000390964 MED1Q15648 1581 aaPredicted RBP-0.12□□□□□ -2.43
SNORA40.3-201ENST00000390964 HECW1Q76N89 1606 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 PHRF1Q9P1Y6 1649 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 ZNF682O95780 498 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 DHFRP00374 187 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 SMIM10L2AP0DMW4 78 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 SMIM10L2BP0DMW5 78 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 RPS20P60866 119 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 SPCS3P61009 180 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 TSNQ15631 228 aaKnown RBP-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 SPOPLQ6IQ16 392 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 OR8D4Q8NGM9 314 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 PTH2Q96A98 100 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 PPP1R2P1Q96PQ5 205 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 PLXND1Q9Y4D7 1925 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 WRNQ14191 1432 aaPredicted RBP eCLIP-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 TNS3Q68CZ2 1445 aa-0.13□□□□□ -2.43
SNORA40.3-201ENST00000390964 MYO18AQ92614 2054 aaKnown RBP-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 PLXNA4Q9HCM2 1894 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 IGLV3-32A0A0A0MS00 114 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 M0R378 163 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 CALB1P05937 261 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 OR2F1Q13607 317 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 ST6GALNAC3Q8NDV1 305 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 TMEM254Q8TBM7 123 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 SPRR2GQ9BYE4 73 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 ORMDL1Q9P0S3 153 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 TNFSF18Q9UNG2 199 aa-0.14□□□□□ -2.43
SNORA40.3-201ENST00000390964 HECW2Q9P2P5 1572 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 SNAPC4Q5SXM2 1469 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 A0A087X0T9 212 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 PIRO00625 290 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 TGOLN2O43493 480 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 CRYZL1O95825 349 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 RBP1P09455 135 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 HIST1H1EP10412 219 aaKnown RBP-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 ANP32AP39687 249 aaKnown RBP-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 ACOT6Q3I5F7 207 aaPredicted RBP-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 HAGHLQ6PII5 290 aaPredicted RBP-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 OR2T10Q8NGZ9 312 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 C14orf105Q9NVL8 296 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 MRPL27Q9P0M9 148 aaKnown RBP-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 CYSLTR1Q9Y271 337 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 PKIGQ9Y2B9 76 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 KDM6AO15550 1401 aaPredicted RBP-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 MUC4Q99102 2169 aa-0.15□□□□□ -2.43
SNORA40.3-201ENST00000390964 MEGF8Q7Z7M0 2845 aa-0.16□□□□□ -2.43
SNORA40.3-201ENST00000390964 TCRBV4S1A1TA0A5B7 111 aa-0.16□□□□□ -2.44
SNORA40.3-201ENST00000390964 HOXA6P31267 233 aa-0.16□□□□□ -2.44
SNORA40.3-201ENST00000390964 FOXA3P55318 350 aaPredicted RBP-0.16□□□□□ -2.44
SNORA40.3-201ENST00000390964 Q6ZS92 163 aa-0.16□□□□□ -2.44
SNORA40.3-201ENST00000390964 LINC00052Q96N35 136 aa-0.16□□□□□ -2.44
SNORA40.3-201ENST00000390964 HIST1H2BLQ99880 126 aa-0.16□□□□□ -2.44
SNORA40.3-201ENST00000390964 NABP2Q9BQ15 211 aa-0.16□□□□□ -2.44
SNORA40.3-201ENST00000390964 MRPS26Q9BYN8 205 aaKnown RBP-0.16□□□□□ -2.44
SNORA40.3-201ENST00000390964 NKIRAS1Q9NYS0 192 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms