RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 LINC00869P0C866 280 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 CA7P43166 264 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 ZNF788Q6ZQV5 615 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 NPIPB3Q92617 1050 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 UPK2O00526 184 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 NDUFB8O95169 186 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 CA1P00915 261 aaPredicted RBP9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 VWC2Q2TAL6 325 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 OR52E5Q8NH55 327 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 SSBP3Q9BWW4 388 aaPredicted RBP9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 TECRQ9NZ01 308 aaKnown RBP9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 M0QZK8 103 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 GGCTO75223 188 aaKnown RBP9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 MOSP00540 346 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 TAS2R45P59539 299 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 Q8N7P7 452 aa9.83□□□□□ -0.84
CAPRIN1-202ENST00000389645 LOC105371242A0A075B767 164 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 CIDEAO60543 219 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 LHBP01229 141 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 CDKN1AP38936 164 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 VAMP3Q15836 100 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 C3orf36Q3SXR2 165 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 C19orf35Q6ZS72 473 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 OR5AU1Q8NGC0 362 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 OR1L8Q8NGR8 309 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 LINC00479Q96M42 142 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 TMEM14BQ9NUH8 114 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 FLNCQ14315 2725 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 PYYP10082 97 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 RANP62826 216 aaKnown RBP9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 RNF2Q99496 336 aa9.82□□□□□ -0.84
CAPRIN1-202ENST00000389645 FRMD6-AS1P0C7T7 363 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 CRISP2P16562 243 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 ADMP35318 185 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 ADORA2A-AS1P86434 159 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 TNXAQ16473 311 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 TMEM200BQ69YZ2 307 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 ATOH7Q8N100 152 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 DDB2Q92466 427 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 FOXA2Q9Y261 457 aaPredicted RBP9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 CFHR2P36980 270 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 PRCDQ00LT1 54 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 MMD2Q8IY49 270 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 OR1B1Q8NGR6 318 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 CMTM2Q8TAZ6 248 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 TXN2Q99757 166 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 E7EQL1 145 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 NUP37Q8NFH4 326 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 RAB1CQ92928 201 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 MRPL18Q9H0U6 180 aaKnown RBP9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 TMEM106BQ9NUM4 274 aa9.81□□□□□ -0.84
CAPRIN1-202ENST00000389645 IGKV1OR2-108A0A075B7D4 117 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 E7EUB6 86 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 NTF3P20783 257 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 RPEL1Q2QD12 228 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 DNLZQ5SXM8 178 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 RNASEH2CQ8TDP1 164 aaKnown RBP9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 TMEM167BQ9NRX6 74 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 LINC00312Q9Y6C7 94 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 PMCHP20382 165 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 SELENOTP62341 195 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 SLC25A48Q6ZT89 311 aaKnown RBP9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 TMEM144Q7Z5S9 345 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 EAF1Q96JC9 268 aaPredicted RBP9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 BTF3L4Q96K17 158 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 PRORYQ9H606 182 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 FAM90A9PA6NNJ1 464 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 SHISA9B4DS77 424 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 LGALS4P56470 323 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 KRTDAPP60985 99 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 ACTL10Q5JWF8 245 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 MIEN1Q9BRT3 115 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 VAMP8Q9BV40 100 aa9.8□□□□□ -0.84
CAPRIN1-202ENST00000389645 SSBP2P81877 361 aaPredicted RBP9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 ZNF596Q8TC21 504 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 TPSG1Q9NRR2 321 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 TP73-AS1Q9UF72 201 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 LSM4Q9Y4Z0 139 aaKnown RBP9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 CAMPP49913 170 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 RPL19P84098 196 aaKnown RBP9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 Q6ZN92 141 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 OR4C13Q8NGP0 309 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 UTP20O75691 2785 aaKnown RBP9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 K7EN84 100 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 LY6HO94772 140 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 C8orf88P0DMB2 117 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 CGB3P0DN86 165 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 CGB7P0DN87 165 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 SUB1P53999 127 aaKnown RBP eCLIP9.79□□□□□ -0.849e-7■■■□□ 17.7
CAPRIN1-202ENST00000389645 LCN2P80188 198 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 VMA21Q3ZAQ7 101 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 C10orf113Q5VZT2 155 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 IGFBPL1Q8WX77 278 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 ZNF430Q9H8G1 570 aaPredicted RBP9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 NGBQ9NPG2 151 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 ZNF355PQ9NSJ1 428 aa9.79□□□□□ -0.84
CAPRIN1-202ENST00000389645 KIR2DL5BA0A0G2JN68 375 aa9.78□□□□□ -0.84
CAPRIN1-202ENST00000389645 KIR2DL5BA0A0G2JPC4 375 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms