RNA–Protein interactions for RNA: ENST00000381029.4

VCX3B-201, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-201ENST00000381029 PUS1Q9Y606 427 aaKnown RBP eCLIP11.13□□□□□ -0.63
VCX3B-201ENST00000381029 IGKV1OR2-108A0A075B7D4 117 aa11.12□□□□□ -0.63
VCX3B-201ENST00000381029 ZNF207O43670 478 aaKnown RBP11.12□□□□□ -0.63
VCX3B-201ENST00000381029 PRAF2O60831 178 aa11.12□□□□□ -0.63
VCX3B-201ENST00000381029 YPEL3P61236 119 aaPredicted RBP11.12□□□□□ -0.63
VCX3B-201ENST00000381029 ETFRF1Q6IPR1 90 aa11.12□□□□□ -0.63
VCX3B-201ENST00000381029 BTNL8Q6UX41 500 aa11.12□□□□□ -0.63
VCX3B-201ENST00000381029 TMEM14EPQ6UXP3 125 aa11.12□□□□□ -0.63
VCX3B-201ENST00000381029 OR1S2Q8NGQ3 325 aa11.12□□□□□ -0.63
VCX3B-201ENST00000381029 NPIPB3Q92617 1050 aa11.12□□□□□ -0.63
VCX3B-201ENST00000381029 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
VCX3B-201ENST00000381029 TRAV30A0A087WSZ9 112 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 C7orf66A4D0T2 115 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 H3BP45 60 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 IFNA4P05014 189 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 OR10J1P30954 320 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 TAS2R30P59541 319 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
VCX3B-201ENST00000381029 C2orf50Q96LR7 162 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 RAB40CQ96S21 281 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 C20orf24Q9BUV8 137 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 VSIRQ9H7M9 311 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 C19orf73Q9NVV2 129 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
VCX3B-201ENST00000381029 HUWE1Q7Z6Z7 4374 aaKnown RBP11.11□□□□□ -0.63
VCX3B-201ENST00000381029 TRAV25A0A0B4J276 109 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 K7EPK0 472 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 CHEK1O14757 476 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 SSSCA1O60232 199 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 CCNKO75909 580 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 APOHP02749 345 aaPredicted RBP11.1□□□□□ -0.63
VCX3B-201ENST00000381029 RAB11AP62491 216 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 SPANXN5Q5MJ07 72 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 FAM90A2PQ658T7 463 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 LILRB2Q8N423 598 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 THAP8Q8NA92 274 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 DYNLRB2Q8TF09 96 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 ACY3Q96HD9 319 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 GPN1Q9HCN4 374 aaPredicted RBP11.1□□□□□ -0.63
VCX3B-201ENST00000381029 PSENENQ9NZ42 101 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 STRAPQ9Y3F4 350 aaKnown RBP11.1□□□□□ -0.63
VCX3B-201ENST00000381029 U3KQE9 123 aa11.1□□□□□ -0.63
VCX3B-201ENST00000381029 TRAV14DV4A0A0A6YYC5 116 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 A8MZ25 164 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 TSC22D2O75157 780 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 PTTG1O95997 202 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 CRYBB3P26998 211 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 RNF2Q99496 336 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 B9D2Q9BPU9 175 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 RHPN1-AS1Q9BWJ2 59 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 SMAD5-AS1Q9Y6J3 95 aa11.09□□□□□ -0.63
VCX3B-201ENST00000381029 C5orf51A6NDU8 294 aa11.08□□□□□ -0.64
VCX3B-201ENST00000381029 TSPAN4O14817 238 aa11.08□□□□□ -0.64
VCX3B-201ENST00000381029 YIF1AO95070 293 aa11.08□□□□□ -0.64
VCX3B-201ENST00000381029 TOMM40O96008 361 aa11.08□□□□□ -0.64
VCX3B-201ENST00000381029 CD7P09564 240 aa11.08□□□□□ -0.64
VCX3B-201ENST00000381029 RPP30P78346 268 aaKnown RBP11.08□□□□□ -0.64
VCX3B-201ENST00000381029 ARL16Q0P5N6 197 aa11.08□□□□□ -0.64
VCX3B-201ENST00000381029 DCTN2Q13561 401 aaKnown RBP11.08□□□□□ -0.64
VCX3B-201ENST00000381029 USF2Q15853 346 aaPredicted RBP11.08□□□□□ -0.64
VCX3B-201ENST00000381029 DEFB121Q5J5C9 76 aa11.08□□□□□ -0.64
VCX3B-201ENST00000381029 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
VCX3B-201ENST00000381029 IGHV3-49A0A0A0MS15 119 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 FAM25EA8MYX2 175 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 SIX6O95475 246 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 SCGB1D2O95969 90 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 PSG1P11464 419 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 H2BFSP57053 126 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 ZNF90Q03938 601 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 RAB32Q13637 225 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 GSG1LQ6UXU4 331 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 ACOT7LQ6ZUV0 252 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 TRGV9Q99603 122 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 GINS3Q9BRX5 216 aa11.07□□□□□ -0.64
VCX3B-201ENST00000381029 IGHV3OR16-13A0A075B7E8 117 aa11.06□□□□□ -0.64
VCX3B-201ENST00000381029 IGHV3-74A0A0B4J1X5 117 aa11.06□□□□□ -0.64
VCX3B-201ENST00000381029 METTL15P1P0C7V9 234 aa11.06□□□□□ -0.64
VCX3B-201ENST00000381029 IGHV4-30-4P0DP06 118 aa11.06□□□□□ -0.64
VCX3B-201ENST00000381029 LINC00322Q6ZN03 302 aaPredicted RBP11.06□□□□□ -0.64
VCX3B-201ENST00000381029 STPG3Q8N7X2 389 aa11.06□□□□□ -0.64
VCX3B-201ENST00000381029 Q8WTZ3 238 aa11.06□□□□□ -0.64
VCX3B-201ENST00000381029 SLC35E1Q96K37 410 aa11.06□□□□□ -0.64
VCX3B-201ENST00000381029 SPAG8Q99932 426 aaPredicted RBP11.06□□□□□ -0.64
VCX3B-201ENST00000381029 STAB2Q8WWQ8 2551 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 FNDC10F2Z333 226 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 H0YIZ8 118 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 GOSR2O14653 212 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 RD3LP0DJH9 198 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 DLK1P80370 383 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 GUCA2BQ16661 112 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 TMEM182Q6ZP80 229 aaPredicted RBP11.05□□□□□ -0.64
VCX3B-201ENST00000381029 NEURL2Q9BR09 285 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 NMES1Q9C002 83 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 WFDC10AQ9H1F0 79 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 PAIP2BQ9ULR5 123 aaKnown RBP11.05□□□□□ -0.64
VCX3B-201ENST00000381029 LSM5Q9Y4Y9 91 aaKnown RBP11.05□□□□□ -0.64
VCX3B-201ENST00000381029 TENM3Q9P273 2699 aa11.05□□□□□ -0.64
VCX3B-201ENST00000381029 SCGB2A1O75556 95 aa11.04□□□□□ -0.64
VCX3B-201ENST00000381029 IL4P05112 153 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms