RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 LAMA4Q16363 1823 aa11.13□□□□□ -0.63
HIPK3-202ENST00000379016 TINCRA0A1B0GVN0 87 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 DAD1P61803 113 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 NDPQ00604 133 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 TOPAZ1Q8N9V7 1692 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 RPL15P61313 204 aaKnown RBP11.12□□□□□ -0.63
HIPK3-202ENST00000379016 ANKRD39Q53RE8 183 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 FAM110DQ8TAY7 271 aaPredicted RBP11.12□□□□□ -0.63
HIPK3-202ENST00000379016 ZNF721Q8TF20 911 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 A0A096LPF7 62 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
HIPK3-202ENST00000379016 C1QTNF9P0C862 333 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 VN1R4Q7Z5H5 301 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 MYMXA0A1B0GTQ4 84 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 SRRM4A7MD48 611 aaKnown RBP11.11□□□□□ -0.63
HIPK3-202ENST00000379016 NBR2O15453 112 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 FOXG1P55316 489 aaPredicted RBP11.11□□□□□ -0.63
HIPK3-202ENST00000379016 RBM38Q9H0Z9 239 aaKnown RBP11.11□□□□□ -0.63
HIPK3-202ENST00000379016 CSTL1Q9H114 145 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 DOCK5Q9H7D0 1870 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 PHF3Q92576 2039 aaKnown RBP11.11□□□□□ -0.63
HIPK3-202ENST00000379016 WNT2P09544 360 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 TCF15Q12870 199 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 BCL6BQ8N143 479 aaPredicted RBP11.11□□□□□ -0.63
HIPK3-202ENST00000379016 MIXL1Q9H2W2 232 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 ZMAT4Q9H898 229 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 VCYO14598 125 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 NANOS3P60323 173 aaKnown RBP11.11□□□□□ -0.63
HIPK3-202ENST00000379016 LY6DQ14210 128 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 LRP6O75581 1613 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 A0A087WWL8 130 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 TIMM21Q9BVV7 248 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 DTX4Q9Y2E6 619 aa11.11□□□□□ -0.63
HIPK3-202ENST00000379016 CRLF1O75462 422 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 CMC4P56277 68 aaPredicted RBP11.1□□□□□ -0.63
HIPK3-202ENST00000379016 CXorf51AA0A1B0GTR3 108 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 RPL23P62829 140 aaKnown RBP11.1□□□□□ -0.63
HIPK3-202ENST00000379016 FAM216BQ8N7L0 139 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 TOGARAM1Q9Y4F4 1720 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 SPSB3Q6PJ21 355 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 A0A1W2PRS3 328 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 LYNX1G3V0Z9 82 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 LYNX1P0DP58 116 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 MORN5Q5VZ52 161 aa11.1□□□□□ -0.63
HIPK3-202ENST00000379016 SLC25A39Q9BZJ4 359 aaPredicted RBP11.1□□□□□ -0.63
HIPK3-202ENST00000379016 RNF125Q96EQ8 232 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 CFHR5Q9BXR6 569 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 A0A1W2PPC1 479 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 F2Z2F3 143 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 SELLP14151 372 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 SRXN1Q9BYN0 137 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 DUSP15Q9H1R2 295 aaPredicted RBP11.09□□□□□ -0.63
HIPK3-202ENST00000379016 A0A087X0K7 114 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 DANCRP0C864 163 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 MPV17L2Q567V2 206 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 ACP7Q6ZNF0 438 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 TRIOBPQ9H2D6 2365 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 HSD52Q0P140 79 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 FAM90A2PQ658T7 463 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 CD300LDQ6UXZ3 194 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 PYYP10082 97 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 SSC5DA1L4H1 1573 aa11.09□□□□□ -0.63
HIPK3-202ENST00000379016 A0A1W2PQF6 199 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 C1QAP02745 245 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 EP300Q09472 2414 aaPredicted RBP11.08□□□□□ -0.64
HIPK3-202ENST00000379016 CASP8AP2Q9UKL3 1982 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 COL6A6A6NMZ7 2263 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 TEX22C9J3V5 150 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 CCL3L1P16619 93 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 PSG3Q16557 428 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 LINC00477Q96M19 166 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 CISD3P0C7P0 127 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 Q9HAA7 133 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 THADAQ6YHU6 1953 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 RGPD5Q99666 1765 aa11.08□□□□□ -0.64
HIPK3-202ENST00000379016 FOXD3Q9UJU5 478 aaPredicted RBP11.08□□□□□ -0.64
HIPK3-202ENST00000379016 DDX60Q8IY21 1712 aaKnown RBP11.08□□□□□ -0.64
HIPK3-202ENST00000379016 ATRXP46100 2492 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 C17orf98A8MV24 154 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 TM4SF5O14894 197 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 RCC1LQ96I51 464 aaKnown RBP11.07□□□□□ -0.64
HIPK3-202ENST00000379016 MSRB2Q9Y3D2 182 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 OVOL1O14753 267 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 SPATA25Q9BR10 227 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 RPL18AQ02543 176 aaKnown RBP11.07□□□□□ -0.64
HIPK3-202ENST00000379016 ZNF660Q6AZW8 331 aaPredicted RBP11.07□□□□□ -0.64
HIPK3-202ENST00000379016 TCRBV5S1A1TA0A578 114 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 IQCF6A8MYZ5 107 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 CXCL10P02778 98 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 C5orf66Q9H5L9 145 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 NABP1Q96AH0 204 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 D6R8Y8 96 aa11.07□□□□□ -0.64
HIPK3-202ENST00000379016 ZCCHC24Q8N2G6 241 aaKnown RBP11.07□□□□□ -0.64
HIPK3-202ENST00000379016 TMEM170AQ8WVE7 144 aa11.06□□□□□ -0.64
HIPK3-202ENST00000379016 KNDC1Q76NI1 1749 aa11.06□□□□□ -0.64
HIPK3-202ENST00000379016 CTSBP07858 339 aa11.06□□□□□ -0.64
HIPK3-202ENST00000379016 TMEM187Q14656 261 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms