RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 TUBA4BQ9H853 241 aa12.15□□□□□ -0.46
RAB3IP-204ENST00000378815 SDF2L1Q9HCN8 221 aa12.15□□□□□ -0.46
RAB3IP-204ENST00000378815 DOK5Q9P104 306 aa12.15□□□□□ -0.46
RAB3IP-204ENST00000378815 YTHDF2Q9Y5A9 579 aaKnown RBP12.15□□□□□ -0.46
RAB3IP-204ENST00000378815 IGLV11-55A0A075B6I3 123 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 A0A0U1RQK1 487 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 IGLC1P0CG04 106 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 GATA3P23771 443 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 BPIFB3P59826 476 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 MORN5Q5VZ52 161 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 C10orf113Q5VZT2 155 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 RPUSD4Q96CM3 377 aaKnown RBP12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 FAM167A-AS1Q96KT0 104 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 FANCD2OSQ96PS1 177 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 SMIM7Q9BQ49 75 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 HSPB9Q9BQS6 159 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 PARLQ9H300 379 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 TMEM167BQ9NRX6 74 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 BEX4Q9NWD9 120 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 KLF17Q5JT82 389 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 OR51G1Q8NGK1 321 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 PIFOQ8TCI5 191 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 SLC25A2Q9BXI2 301 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 GSX1Q9H4S2 264 aaPredicted RBP12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
RAB3IP-204ENST00000378815 A0A087WWC5 75 aa12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 ELOA3CA0A087WX78 387 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 F6UZH7 168 aa12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 KIAA0141Q14154 515 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 NAT8Q9UHE5 227 aa12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 KMT2BQ9UMN6 2715 aaPredicted RBP12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 B4DEV8 164 aa12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 OR7C2O60412 319 aa12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 ZNF674Q2M3X9 581 aa12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 RBM14Q96PK6 669 aaKnown RBP12.13□□□□□ -0.47
RAB3IP-204ENST00000378815 TRAV5A0A0B4J249 113 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 COLCA2A8K830 154 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 PLP1P60201 277 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 DEFB113Q30KQ7 82 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 C5orf56Q8N8D9 126 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 LINC01356Q8N9X3 169 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 UHRF2Q96PU4 802 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 ZNF355PQ9NSJ1 428 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 AVPP01185 164 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 IGKV1-17P01599 117 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 PLA2G2AP14555 144 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 LRRC75A-AS1Q8N1F1 130 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 C15orf54Q8N8G6 183 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 CSMD2Q7Z408 3487 aa12.12□□□□□ -0.47
RAB3IP-204ENST00000378815 LINC00305Q7Z4B0 112 aa12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 ISOC2Q96AB3 205 aa12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 USP9YO00507 2555 aaPredicted RBP12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 OR10J4P0C629 311 aa12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 ORM2P19652 201 aa12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 LOXL1Q08397 574 aaPredicted RBP12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 TIGITQ495A1 244 aa12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 OR5AU1Q8NGC0 362 aa12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 OR1B1Q8NGR6 318 aa12.11□□□□□ -0.47
RAB3IP-204ENST00000378815 CELSR2Q9HCU4 2923 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 HYPMO75409 117 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 NDUFB4O95168 129 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 PSG1P11464 419 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 OR5T1Q8NG75 326 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 ZNF48Q96MX3 618 aaPredicted RBP12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 MOB4Q9Y3A3 225 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 SOX21Q9Y651 276 aaPredicted RBP12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 ATP6V0E1O15342 81 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 OR2C1O95371 312 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 TMEM219Q86XT9 240 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 SSX3Q99909 188 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 THYN1Q9P016 225 aa12.1□□□□□ -0.47
RAB3IP-204ENST00000378815 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 SCO2A0A1W2PP80 73 aa12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 J3QKU1 62 aa12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 RPL23P62829 140 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 KLK9Q2XQG4 91 aa12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 FAM110DQ8TAY7 271 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 YPEL4Q96NS1 127 aa12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 DERL1Q9BUN8 251 aa12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 KLK9Q9UKQ9 250 aa12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 CHD6Q8TD26 2715 aa12.09□□□□□ -0.47
RAB3IP-204ENST00000378815 A0A1W2PRE2 83 aa12.08□□□□□ -0.47
RAB3IP-204ENST00000378815 AMY1AP04745 511 aa12.08□□□□□ -0.47
RAB3IP-204ENST00000378815 FABP1P07148 127 aa12.08□□□□□ -0.47
RAB3IP-204ENST00000378815 ATF4P18848 351 aaPredicted RBP12.08□□□□□ -0.47
RAB3IP-204ENST00000378815 UBE2L3P68036 154 aaKnown RBP12.08□□□□□ -0.47
RAB3IP-204ENST00000378815 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.47
RAB3IP-204ENST00000378815 C11orf52Q96A22 123 aa12.08□□□□□ -0.47
RAB3IP-204ENST00000378815 ABCA1O95477 2261 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 LINC01548A6NM66 108 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 F8W735 103 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 J3QLI3 93 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 NDUFB8O95169 186 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 RD3LP0DJH9 198 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 MFAP4P55083 255 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 ADIRFQ15847 76 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 UNQ5815/PRO19632Q6UWF5 114 aa12.08□□□□□ -0.48
RAB3IP-204ENST00000378815 PAXXQ9BUH6 204 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms