RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 FREM1Q5H8C1 2179 aa9.11□□□□□ -0.95
MDC1-201ENST00000376406 CD55P08174 381 aa9.11□□□□□ -0.95
MDC1-201ENST00000376406 SRD5A1P18405 259 aa9.11□□□□□ -0.95
MDC1-201ENST00000376406 UBE2CO00762 179 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 IGHV3-23P01764 117 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 TMEM101Q96IK0 257 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 GPR179Q6PRD1 2367 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 A0A1B0GUT8 65 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 TMEM178BH3BS89 294 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 J3QLI3 93 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 PCDH15Q96QU1 1955 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 PTPRQQ9UMZ3 2332 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 NCOA6Q14686 2063 aaPredicted RBP9.1□□□□□ -0.95
MDC1-201ENST00000376406 TRBV6-6A0A0A6YYG2 114 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 IGHV1-46P01743 117 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 LYL1P12980 280 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 LGALS3P17931 250 aaKnown RBP9.1□□□□□ -0.95
MDC1-201ENST00000376406 CIARTQ8N365 385 aaPredicted RBP9.1□□□□□ -0.95
MDC1-201ENST00000376406 SLC50A1Q9BRV3 221 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 IGHV3OR16-12A0A075B7B8 117 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 IGHV3OR16-10A0A075B7F0 116 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 SRRM5B3KS81 715 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 OTX1P32242 354 aaPredicted RBP9.1□□□□□ -0.95
MDC1-201ENST00000376406 CD69Q07108 199 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 FHL1Q13642 323 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 FAM208BQ5VWN6 2430 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 PLCE1Q9P212 2302 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 TRBV20OR9-2A0A075B6H5 130 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 E9PQ18 207 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 Q0VFX4 171 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 TMEM42Q69YG0 159 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 FAM71F2Q6NXP2 309 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 WNT10AQ9GZT5 417 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 C7orf71A4D174 169 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 NPFFO15130 113 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 ZNF324O75467 553 aaPredicted RBP9.1□□□□□ -0.95
MDC1-201ENST00000376406 FOXL2NBQ6ZUU3 175 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 ATOH7Q8N100 152 aa9.1□□□□□ -0.95
MDC1-201ENST00000376406 PSMB11A5LHX3 300 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 PRELID3AQ96N28 172 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 REG4Q9BYZ8 158 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 COL4A4P53420 1690 aaPredicted RBP9.09□□□□□ -0.95
MDC1-201ENST00000376406 TRAV1-1A0A0B4J248 108 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 LDLRAD2Q5SZI1 272 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 HEPN1Q6WQI6 88 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 USMG5Q96IX5 58 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 SRSF8Q9BRL6 282 aaKnown RBP9.09□□□□□ -0.95
MDC1-201ENST00000376406 ADMP35318 185 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 SPSB3Q6PJ21 355 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 ZNF414Q96IQ9 312 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 C2orf88Q9BSF0 95 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 DYSFO75923 2080 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 CEACAM4O75871 244 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 LEPP41159 167 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 Q6ZS49 121 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 TMEM167AQ8TBQ9 72 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 HIGD1CA8MV81 97 aa9.09□□□□□ -0.95
MDC1-201ENST00000376406 HIST1H1AQ02539 215 aaPredicted RBP9.09□□□□□ -0.95
MDC1-201ENST00000376406 TRAV40A0A0B4J280 105 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 EFNB3Q15768 340 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 OR10J3Q5JRS4 329 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 SP5Q6BEB4 398 aaPredicted RBP9.08□□□□□ -0.96
MDC1-201ENST00000376406 NAPSAO96009 420 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 ZNF600Q6ZNG1 722 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 GNB1LQ9BYB4 327 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 OSTCQ9NRP0 149 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 APOHP02749 345 aaPredicted RBP9.08□□□□□ -0.96
MDC1-201ENST00000376406 FOXF2Q12947 444 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 ZNF56Q15929 161 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 KLHDC3Q9BQ90 382 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 A0A1W2PRE2 83 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 CRXO43186 299 aaPredicted RBP9.08□□□□□ -0.96
MDC1-201ENST00000376406 CCL3L1P16619 93 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 B3GALT5-AS1P59052 145 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 TRBV7-1A0A0A6YYK4 115 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 C1QTNF9BB2RNN3 333 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 COX6CP09669 75 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 GATA2P23769 480 aaPredicted RBP9.08□□□□□ -0.96
MDC1-201ENST00000376406 ASIPP42127 132 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 C1QL4Q86Z23 238 aa9.08□□□□□ -0.96
MDC1-201ENST00000376406 ITLN2Q8WWU7 325 aaPredicted RBP9.07□□□□□ -0.96
MDC1-201ENST00000376406 RNASE7Q9H1E1 156 aaKnown RBP9.07□□□□□ -0.96
MDC1-201ENST00000376406 MALRD1Q5VYJ5 2156 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 GPR183P32249 361 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 NMSQ5H8A3 153 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 TFF1P04155 84 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 PARD6GQ9BYG4 376 aaPredicted RBP9.07□□□□□ -0.96
MDC1-201ENST00000376406 TTC28Q96AY4 2481 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 A6NNC1 897 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 CTAG1AP78358 180 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 EPDR1Q9UM22 224 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 SMIM13P0DJ93 91 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 C3orf56Q8N813 242 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 VSIRQ9H7M9 311 aa9.07□□□□□ -0.96
MDC1-201ENST00000376406 F11RQ9Y624 299 aaKnown RBP9.07□□□□□ -0.96
MDC1-201ENST00000376406 DUX3Q96PT4 197 aa9.06□□□□□ -0.96
MDC1-201ENST00000376406 TEX38Q6PEX7 206 aa9.06□□□□□ -0.96
MDC1-201ENST00000376406 SMIM12Q96EX1 92 aa9.06□□□□□ -0.96
MDC1-201ENST00000376406 ALKBH7Q9BT30 221 aaPredicted RBP9.06□□□□□ -0.96
MDC1-201ENST00000376406 A0A1B0GV90 55 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms