RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PLA2G2CQ5R387 149 aa11.21□□□□□ -0.61
C9orf47-203ENST00000375851 OCC1Q8TAD7 63 aa11.21□□□□□ -0.61
C9orf47-203ENST00000375851 GAFA1Q96PS6 74 aa11.21□□□□□ -0.61
C9orf47-203ENST00000375851 PRELID3AQ96N28 172 aa11.21□□□□□ -0.61
C9orf47-203ENST00000375851 RFNGQ9Y644 331 aa11.21□□□□□ -0.61
C9orf47-203ENST00000375851 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.61
C9orf47-203ENST00000375851 CEACAM4O75871 244 aa11.21□□□□□ -0.61
C9orf47-203ENST00000375851 C1orf147Q96MC9 270 aaPredicted RBP11.21□□□□□ -0.61
C9orf47-203ENST00000375851 PLXNA2O75051 1894 aa11.21□□□□□ -0.62
C9orf47-203ENST00000375851 TRAV9-1A0A075B6T8 112 aa11.21□□□□□ -0.62
C9orf47-203ENST00000375851 C12orf54Q6X4T0 127 aa11.21□□□□□ -0.62
C9orf47-203ENST00000375851 STAG3L2P0CL84 134 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 STAG3L3P0CL85 134 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 TMEM70Q9BUB7 260 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 SLC25A48Q6ZT89 311 aaKnown RBP11.2□□□□□ -0.62
C9orf47-203ENST00000375851 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 A0A0G2JRQ6 117 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 IZUMO1RA6ND01 250 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 Q6ZRM9 215 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 RPRMLQ8N4K4 120 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 NPFFR1Q9GZQ6 430 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 LINC00527Q9UJ94 153 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 MSRB2Q9Y3D2 182 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 SOX21Q9Y651 276 aaPredicted RBP11.2□□□□□ -0.62
C9orf47-203ENST00000375851 AREGP15514 252 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 ASIPP42127 132 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 UQCRFS1P47985 274 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
C9orf47-203ENST00000375851 PET117Q6UWS5 81 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 TMEM167AQ8TBQ9 72 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 DMRT1Q9Y5R6 373 aa11.2□□□□□ -0.62
C9orf47-203ENST00000375851 TRAV5A0A0B4J249 113 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 Q6AWC8 147 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 TRAV1-1A0A0B4J248 108 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 LY6HO94772 140 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 PF4P02776 101 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 GLRX5Q86SX6 157 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 FER1L6-AS1Q8NA97 138 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 OR4X2Q8NGF9 303 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 NEUROG1Q92886 237 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 OSTCQ9NRP0 149 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 TBL2Q9Y4P3 447 aaKnown RBP11.19□□□□□ -0.62
C9orf47-203ENST00000375851 C7orf71A4D174 169 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 GNLYP22749 145 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 KLRD1Q13241 179 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 DTX1Q86Y01 620 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 PLXND1Q9Y4D7 1925 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 IGKV1-6A0A0C4DH72 117 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 HOXA5P20719 270 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 NTF4P34130 210 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 C19orf54Q5BKX5 351 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 TCF23Q7RTU1 214 aa11.19□□□□□ -0.62
C9orf47-203ENST00000375851 MBNL3Q9NUK0 354 aaKnown RBP11.19□□□□□ -0.62
C9orf47-203ENST00000375851 YLPM1P49750 1951 aaKnown RBP11.18□□□□□ -0.62
C9orf47-203ENST00000375851 FABP5P3A8MUU1 101 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
C9orf47-203ENST00000375851 APOHP02749 345 aaPredicted RBP11.18□□□□□ -0.62
C9orf47-203ENST00000375851 MYOD1P15172 320 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 C18orf15Q96N68 181 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 MIEN1Q9BRT3 115 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 RSPO1Q2MKA7 263 aaPredicted RBP11.18□□□□□ -0.62
C9orf47-203ENST00000375851 TEX38Q6PEX7 206 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 SLC50A1Q9BRV3 221 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 DOCK11Q5JSL3 2073 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 FBLL1A6NHQ2 334 aaKnown RBP11.18□□□□□ -0.62
C9orf47-203ENST00000375851 H0YJW9 148 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 PRR30Q53SZ7 412 aaPredicted RBP11.18□□□□□ -0.62
C9orf47-203ENST00000375851 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 REC114Q7Z4M0 266 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 ST6GALNAC3Q8NDV1 305 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 C8orf46Q8TAG6 207 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 SEPSECSQ9HD40 501 aaKnown RBP11.18□□□□□ -0.62
C9orf47-203ENST00000375851 GCSHP23434 173 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 TPTE2P1Q5T6R2 138 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 VMO1Q7Z5L0 202 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 FAM19A2Q8N3H0 131 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 PSG8Q9UQ74 426 aa11.18□□□□□ -0.62
C9orf47-203ENST00000375851 CUL9Q8IWT3 2517 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 NUTF2P61970 127 aaKnown RBP11.17□□□□□ -0.62
C9orf47-203ENST00000375851 SPATA31B1PQ5VZV4 182 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 PRSS22Q9GZN4 317 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 FRMPD3Q5JV73 1810 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 K7ENP7 123 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 UBE2L6O14933 153 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 CIDEAO60543 219 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 PRSS2P07478 247 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 WNT2P09544 360 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 COL8A2P25067 703 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 KIR3DL3Q8N743 410 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 E7EQL1 145 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 PSG1P11464 419 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 ZNF585BQ52M93 769 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 ZNF414Q96IQ9 312 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 MGST2Q99735 147 aa11.17□□□□□ -0.62
C9orf47-203ENST00000375851 LHFPL4Q7Z7J7 247 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 ITLN2Q8WWU7 325 aaPredicted RBP11.16□□□□□ -0.62
C9orf47-203ENST00000375851 TMEM238LA0A1B0GVL6 79 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 A0A1B0GW15 77 aa11.16□□□□□ -0.62
C9orf47-203ENST00000375851 A6NJY4 79 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms