RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 IGF1P05019 195 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 HIST1H1BP16401 226 aaKnown RBP8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 SULT1A2P50226 295 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 RAB5CP51148 216 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 KRTAP10-11P60412 298 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 SERF2P84101 59 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 RUNX1Q01196 453 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 ECSCRQ19T08 205 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 DEFB121Q5J5C9 76 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 CLLU1Q5K131 121 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 FAM74A1Q5RGS3 127 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 C19orf35Q6ZS72 473 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 RSG1Q9BU20 258 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 NPCDR1Q9BY65 106 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 FNDC4Q9H6D8 234 aaPredicted RBP8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 PLA2G2EQ9NZK7 142 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 THYN1Q9P016 225 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 DMRT1Q9Y5R6 373 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 RFNGQ9Y644 331 aa8.51□□□□□ -1.05
HLA-DQA1-202ENST00000374949 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TRAV41A0A0B4J266 112 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 I3L2K1 104 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 SOX15O60248 233 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 MT-CO2P00403 227 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 PF4P02776 101 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 HOXD3P31249 432 aaPredicted RBP8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 CAMLGP49069 296 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 BLOC1S1P78537 153 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 KLK9Q2XQG4 91 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TMEM182Q6ZP80 229 aaPredicted RBP8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 WFDC9Q8NEX5 89 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 NPIPB3Q92617 1050 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 SAT2Q96F10 170 aaPredicted RBP8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 ACY3Q96HD9 319 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 KLK9Q9UKQ9 250 aa8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 LSM4Q9Y4Z0 139 aaKnown RBP8.5□□□□□ -1.05
HLA-DQA1-202ENST00000374949 ZNF705EA8MWA4 302 aaPredicted RBP8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 G3V318 75 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 AP4M1O00189 453 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 AGPAT2O15120 278 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 MBP02144 154 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 PRH1P02810 166 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 NMBP08949 121 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 NDUFA5Q16718 116 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TCTEX1D4Q5JR98 221 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 AKR1C8PQ5T2L2 129 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TMEM116Q8NCL8 245 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 OR5AU1Q8NGC0 362 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 PCNPQ8WW12 178 aaKnown RBP8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 FANCD2OSQ96PS1 177 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 MGST2Q99735 147 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 KCNIP2Q9NS61 270 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 ZNF355PQ9NSJ1 428 aa8.49□□□□□ -1.05
HLA-DQA1-202ENST00000374949 IGHV3-21A0A0B4J1V1 117 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 K7EIM0 57 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 NDUFB8O95169 186 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 IGHV3-48P01763 117 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 OR10J1P30954 320 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 RPL29P47914 159 aaKnown RBP8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 RND2P52198 227 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 C19orf54Q5BKX5 351 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 KHDC1LQ5JSQ8 128 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 FFAR4Q5NUL3 377 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 ACSM6Q6P461 480 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 DPPA3Q6W0C5 159 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 THAP8Q8NA92 274 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 OR4X1Q8NH49 305 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 RCC1LQ96I51 464 aaKnown RBP8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 WWC2-AS2Q96NR7 200 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 GGTLC1Q9BX51 225 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 LINC00527Q9UJ94 153 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 FBXL7Q9UJT9 491 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 ZNF580Q9UK33 172 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 SLC45A2Q9UMX9 530 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 DNAH9Q9NYC9 4486 aa8.48□□□□□ -1.05
HLA-DQA1-202ENST00000374949 IGKV1OR2-108A0A075B7D4 117 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TRBV9A0A0B4J1U6 114 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TCRBV4S1A1TA0A5B7 111 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 ZFP92A6NM28 416 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 OR2J3O76001 311 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 BRI3O95415 125 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 NPBWR1P48145 328 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 MFAP4P55083 255 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 ACOT6Q3I5F7 207 aaPredicted RBP8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TMEM41BQ5BJD5 291 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 C10orf99Q6UWK7 81 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 CYP2G1PQ6ZSU1 146 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 FAM213BQ8TBF2 198 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 VN1R17PQ8TDU5 208 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 NOL4LQ96MY1 436 aaPredicted RBP8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TRGV9Q99603 122 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TXN2Q99757 166 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 B9D2Q9BPU9 175 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 MRPL36Q9P0J6 103 aaKnown RBP8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 PXMP4Q9Y6I8 212 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 STAB2Q8WWQ8 2551 aa8.47□□□□□ -1.05
HLA-DQA1-202ENST00000374949 TRAV30A0A087WSZ9 112 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 LINC00862A6NCI5 91 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 H3BUA1 57 aa8.46□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CLN5O75503 358 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms