RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 H3BP45 60 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 ZNF816Q0VGE8 651 aaPredicted RBP6.39□□□□□ -1.39
USP48-203ENST00000374732 KIR3DS1Q14943 382 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 C12orf73Q69YU5 71 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 SLC48A1Q6P1K1 146 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 SLC22A24Q8N4F4 322 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 PPP1R1CQ8WVI7 109 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 KXD1Q9BQD3 176 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 RBAKDNA6NC62 111 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 SERF1AO75920 110 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 GFERP55789 205 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 CLEC12BQ2HXU8 276 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 VMA21Q3ZAQ7 101 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 SGMS2Q8NHU3 365 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 ZPLD1Q8TCW7 415 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 LSM10Q969L4 123 aaKnown RBP6.39□□□□□ -1.39
USP48-203ENST00000374732 SMDT1Q9H4I9 107 aa6.39□□□□□ -1.39
USP48-203ENST00000374732 DNAJB12Q9NXW2 375 aaKnown RBP6.39□□□□□ -1.39
USP48-203ENST00000374732 TRAV27A0A087WT01 109 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 C10orf142B7Z368 130 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 CBLN1P23435 193 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 PEBP1P30086 187 aaKnown RBP6.38□□□□□ -1.39
USP48-203ENST00000374732 NCBP2P52298 156 aaKnown RBP eCLIP6.38□□□□□ -1.39
USP48-203ENST00000374732 ZNF726P1Q15940 193 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 Q6ZQT7 251 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 PCP2Q8IVA1 136 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 OR2T6Q8NHC8 308 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 FGF14Q92915 247 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 HEATR5BQ9P2D3 2071 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 TRDV1A0A1B0GX56 115 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 UQCRQO14949 82 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 BCL2P10415 239 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 CA7P43166 264 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 MRPS21P82921 87 aaKnown RBP6.38□□□□□ -1.39
USP48-203ENST00000374732 GAGE13Q4V321 117 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 LINC01356Q8N9X3 169 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 LY6G5BQ8NDX9 201 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 OR8S1Q8NH09 359 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 C18orf32Q8TCD1 76 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
USP48-203ENST00000374732 F6UB75 175 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 ATP5G1P05496 136 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
USP48-203ENST00000374732 C12orf74Q32Q52 190 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 MRGPREQ86SM8 312 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 SLC25A42Q86VD7 318 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 C1orf158Q8N1D5 194 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 OR8B3Q8NGG8 313 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 TSACCQ96A04 125 aaPredicted RBP6.37□□□□□ -1.39
USP48-203ENST00000374732 CNRIP1Q96F85 164 aaPredicted RBP6.37□□□□□ -1.39
USP48-203ENST00000374732 LINC00526Q96FQ7 95 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 COMMD5Q9GZQ3 224 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 TRAV13-1A0A0B4J241 112 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 IRGMA1A4Y4 181 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 C17orf112F2Z3M2 114 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 CCL21O00585 134 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 CD55P08174 381 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 NR2C2APQ86WQ0 139 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 LMX1AQ8TE12 382 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 IGF2BP2-AS1Q96M15 143 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 PMCHL2Q9BQD1 86 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 MRPL20Q9BYC9 149 aaKnown RBP6.37□□□□□ -1.39
USP48-203ENST00000374732 ABCA7Q8IZY2 2146 aa6.37□□□□□ -1.39
USP48-203ENST00000374732 PRR32B1ATL7 298 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 C4orf51C9J302 202 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 LYPD3O95274 346 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 RBP4P02753 201 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 C3orf79P0CE67 100 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 FOXC1Q12948 553 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 NMSQ5H8A3 153 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 MORN4Q8NDC4 146 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 OR5H2Q8NGV7 314 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 ATP6V0E2Q8NHE4 81 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 SPATA3Q8NHX4 192 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 FLVCR1-AS1Q8TAF5 88 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 MRPL24Q96A35 216 aaKnown RBP6.36□□□□□ -1.39
USP48-203ENST00000374732 FGF22Q9HCT0 170 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 AMMECR1Q9Y4X0 333 aaPredicted RBP6.36□□□□□ -1.39
USP48-203ENST00000374732 POLEQ07864 2286 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 A0A1B0GV50 99 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 FAM24AA6NFZ4 105 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 IGHA1P01876 353 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 HMGN2P05204 90 aaKnown RBP6.36□□□□□ -1.39
USP48-203ENST00000374732 OR5AL1P0C617 328 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 CCL1P22362 96 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 NUMA1Q14980 2115 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 AAED1Q7RTV5 226 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 VN1R4Q7Z5H5 301 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 RPS4Y2Q8TD47 263 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 C10orf105Q8TEF2 133 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 FGF11Q92914 225 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 NAA60Q9H7X0 242 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 LSM2Q9Y333 95 aaKnown RBP6.36□□□□□ -1.39
USP48-203ENST00000374732 HILPDAQ9Y5L2 63 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 ZNF318Q5VUA4 2279 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 LINC01565O15544 149 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 EPPINO95925 133 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 OR9G9P0C7N8 305 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 PTGDSP41222 190 aa6.36□□□□□ -1.39
USP48-203ENST00000374732 CSN1S1P47710 185 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms