RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 LMO7DNF2Z398 122 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 NCR2O95944 276 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 C8orf88P0DMB2 117 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 CEBPDP49716 269 aaPredicted RBP10.52□□□□□ -0.73
PRPF4-201ENST00000374198 AESQ08117 197 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 TIMM23BQ5SRD1 257 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 LINC00696Q6ZRV3 163 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 WDR86Q86TI4 376 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 FAM222BQ8WU58 562 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 ZNF747Q9BV97 191 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 C19orf24Q9BVV8 132 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 IGHV3-43A0A0B4J1X8 118 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 ZNF503-AS2A6NEH8 195 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 IGHV3-43DP0DP04 118 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 ERVK-16P61578 105 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 OR2Z1Q8NG97 314 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 OR4X2Q8NGF9 303 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 NEU4Q8WWR8 484 aaPredicted RBP10.52□□□□□ -0.73
PRPF4-201ENST00000374198 SLC25A33Q9BSK2 321 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 SOX21Q9Y651 276 aaPredicted RBP10.52□□□□□ -0.73
PRPF4-201ENST00000374198 CACNA1AO00555 2505 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 DCHS1Q96JQ0 3298 aa10.52□□□□□ -0.73
PRPF4-201ENST00000374198 A6NJY4 79 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 DEFB108AA8MXU0 73 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 FNDC10F2Z333 226 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 J3QR89 54 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 SMAD7O15105 426 aaKnown RBP10.51□□□□□ -0.73
PRPF4-201ENST00000374198 SIVA1O15304 175 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 CELA2AP08217 269 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 YRDCQ86U90 279 aaKnown RBP10.51□□□□□ -0.73
PRPF4-201ENST00000374198 SLC25A45Q8N413 288 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 POLDIP2Q9Y2S7 368 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 SPEGQ15772 3267 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 NCKAP5O14513 1909 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 PEX7O00628 323 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 OR10D3Q8NH80 312 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 ABHD17AQ96GS6 310 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 TMEM140Q9NV12 185 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 NCOR2Q9Y618 2525 aa10.51□□□□□ -0.73
PRPF4-201ENST00000374198 PROP1O75360 226 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
PRPF4-201ENST00000374198 BLNKQ8WV28 456 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 MRAP2Q96G30 205 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 RTL8AQ9BWD3 113 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 ASXL3Q9C0F0 2248 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 K7EQM0 130 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 MGST3O14880 152 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 IGHV3-7P01780 117 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 ZNF137PP52743 207 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 DHRS13Q6UX07 377 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 TMEM116Q8NCL8 245 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 GTSF1Q8WW33 167 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 PGLYRP4Q96LB8 373 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 FER1L6-AS2Q96M78 137 aa10.5□□□□□ -0.73
PRPF4-201ENST00000374198 SPANXB1Q9NS25 103 aaPredicted RBP10.5□□□□□ -0.73
PRPF4-201ENST00000374198 IGKV1OR2-108A0A075B7D4 117 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 SMIM13P0DJ93 91 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 PLGLB1Q02325 96 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 FAM167A-AS1Q96KT0 104 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 VGLL1Q99990 258 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 FAM234AQ9H0X4 552 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 RPP21Q9H633 154 aaKnown RBP10.49□□□□□ -0.73
PRPF4-201ENST00000374198 TRAV5A0A0B4J249 113 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 A8MWL6 223 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 CHEK1O14757 476 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 CSN3P07498 182 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 FCGR2BP31994 310 aaPredicted RBP10.49□□□□□ -0.73
PRPF4-201ENST00000374198 GPR12P47775 334 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 RFESDQ8TAC1 157 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 DUSP23Q9BVJ7 150 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 SLC25A2Q9BXI2 301 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 INSIG2Q9Y5U4 225 aa10.49□□□□□ -0.73
PRPF4-201ENST00000374198 FBLL1A6NHQ2 334 aaKnown RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 MRPL33O75394 65 aaKnown RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 MORN5Q5VZ52 161 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 ACP7Q6ZNF0 438 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 MOB3BQ86TA1 216 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 COQ2Q96H96 371 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 GEMIN7Q9H840 131 aaKnown RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 ENY2Q9NPA8 101 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 AP5S1Q9NUS5 200 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 TEX50A0A1B0GTY4 177 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 C15orf61A6NNL5 157 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 KLK10O43240 276 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 SCRG1O75711 98 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 KLF7O75840 302 aaPredicted RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 OCIAD1Q9NX40 245 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 KLF13Q9Y2Y9 288 aaPredicted RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 TET2Q6N021 2002 aaPredicted RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 IGHV3-64DA0A0J9YX35 117 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 CSN1S1P47710 185 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 FOXG1P55316 489 aaPredicted RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 RPS19BP1Q86WX3 136 aaKnown RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 MRPL32Q9BYC8 188 aaKnown RBP10.48□□□□□ -0.73
PRPF4-201ENST00000374198 PRSS22Q9GZN4 317 aa10.48□□□□□ -0.73
PRPF4-201ENST00000374198 HSPE1P61604 102 aaKnown RBP10.47□□□□□ -0.73
PRPF4-201ENST00000374198 CT83Q5H943 113 aa10.47□□□□□ -0.73
PRPF4-201ENST00000374198 ZADH2Q8N4Q0 377 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms