RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 TRBV20OR9-2A0A075B6H5 130 aa15.52■□□□□ 0.08
HDAC1-201ENST00000373548 IGHV4-61A0A0C4DH41 118 aa15.52■□□□□ 0.08
HDAC1-201ENST00000373548 NCBP2LA6PVI3 153 aaKnown RBP15.52■□□□□ 0.08
HDAC1-201ENST00000373548 TMEM11P17152 192 aa15.52■□□□□ 0.08
HDAC1-201ENST00000373548 SAA4P35542 130 aa15.52■□□□□ 0.08
HDAC1-201ENST00000373548 SMUG1Q53HV7 270 aa15.52■□□□□ 0.08
HDAC1-201ENST00000373548 LINC01551Q86U37 167 aa15.52■□□□□ 0.08
HDAC1-201ENST00000373548 GSX1Q9H4S2 264 aaPredicted RBP15.52■□□□□ 0.08
HDAC1-201ENST00000373548 CX3CL1P78423 397 aa15.52■□□□□ 0.07
HDAC1-201ENST00000373548 ZNF843Q8N446 348 aa15.52■□□□□ 0.07
HDAC1-201ENST00000373548 OR5AU1Q8NGC0 362 aa15.52■□□□□ 0.07
HDAC1-201ENST00000373548 VWC2LB2RUY7 222 aa15.51■□□□□ 0.07
HDAC1-201ENST00000373548 ATP5J2P56134 94 aa15.51■□□□□ 0.07
HDAC1-201ENST00000373548 NDPQ00604 133 aa15.51■□□□□ 0.07
HDAC1-201ENST00000373548 ZNF562Q6V9R5 426 aa15.51■□□□□ 0.07
HDAC1-201ENST00000373548 SAV1Q9H4B6 383 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-201ENST00000373548 MYO18BQ8IUG5 2567 aa15.51■□□□□ 0.07
HDAC1-201ENST00000373548 PGPEP1LA6NFU8 196 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 RPS10P46783 165 aaKnown RBP15.5■□□□□ 0.07
HDAC1-201ENST00000373548 FAM120AOSQ5T036 256 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 ASPHD1Q5U4P2 390 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 OR5T1Q8NG75 326 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 AURKAIP1Q9NWT8 199 aaPredicted RBP15.5■□□□□ 0.07
HDAC1-201ENST00000373548 ZNF462Q96JM2 2506 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 ELOA3CA0A087WX78 387 aaPredicted RBP15.5■□□□□ 0.07
HDAC1-201ENST00000373548 K7EIM0 57 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 NDUFS8O00217 210 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 IGLC1P0CG04 106 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 C1QL4Q86Z23 238 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 ARPC1AQ92747 370 aa15.5■□□□□ 0.07
HDAC1-201ENST00000373548 GGTLC3B5MD39 225 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 H7BYZ3 331 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 NPFFO15130 113 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 ORM2P19652 201 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 UBE2L3P68036 154 aaKnown RBP15.49■□□□□ 0.07
HDAC1-201ENST00000373548 PAX8Q06710 450 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 CLEC2AQ6UVW9 174 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 LINC00305Q7Z4B0 112 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 PIP4P2Q8N4L2 257 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 OR1B1Q8NGR6 318 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 BIN3Q9NQY0 253 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 KMT2BQ9UMN6 2715 aaPredicted RBP15.49■□□□□ 0.07
HDAC1-201ENST00000373548 CENPVL3A0A0U1RRI6 287 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 A0A1W2PRE2 83 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 TSPAN9O75954 239 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 FAM106CPP0CH98 169 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 PYYP10082 97 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 ANAPC16Q96DE5 110 aa15.49■□□□□ 0.07
HDAC1-201ENST00000373548 KLF17Q5JT82 389 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-201ENST00000373548 Q8N9W7 124 aa15.48■□□□□ 0.07
HDAC1-201ENST00000373548 OR1L6Q8NGR2 347 aa15.48■□□□□ 0.07
HDAC1-201ENST00000373548 PAXXQ9BUH6 204 aa15.48■□□□□ 0.07
HDAC1-201ENST00000373548 NPIPB5A8MRT5 1133 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 PFN1P07737 140 aaKnown RBP15.47■□□□□ 0.07
HDAC1-201ENST00000373548 PLP1P60201 277 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 PERPQ96FX8 193 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 FAM210BQ96KR6 192 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 OR51M1Q9H341 326 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 SPG11Q96JI7 2443 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 TRBV24-1A0A075B6N3 115 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 IGHV4-30-2A0A087WSY4 118 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 CRYBB3P26998 211 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 BRS3P32247 399 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 NECAP1Q8NC96 275 aa15.47■□□□□ 0.07
HDAC1-201ENST00000373548 HYPMO75409 117 aa15.46■□□□□ 0.07
HDAC1-201ENST00000373548 PSG1P11464 419 aa15.46■□□□□ 0.07
HDAC1-201ENST00000373548 RPL35P42766 123 aaKnown RBP15.46■□□□□ 0.07
HDAC1-201ENST00000373548 SUMO1P63165 101 aaKnown RBP15.46■□□□□ 0.07
HDAC1-201ENST00000373548 SRSF1Q07955 248 aaKnown RBP eCLIP15.46■□□□□ 0.073e-6■■■□□ 14.6
HDAC1-201ENST00000373548 TIGITQ495A1 244 aa15.46■□□□□ 0.07
HDAC1-201ENST00000373548 OCC1Q8TAD7 63 aa15.46■□□□□ 0.07
HDAC1-201ENST00000373548 FXYD5Q96DB9 178 aa15.46■□□□□ 0.07
HDAC1-201ENST00000373548 ELOVL1Q9BW60 279 aa15.46■□□□□ 0.07
HDAC1-201ENST00000373548 IGHV7-81A0A0B4J1V7 117 aa15.46■□□□□ 0.06
HDAC1-201ENST00000373548 IGKV1-17P01599 117 aa15.46■□□□□ 0.06
HDAC1-201ENST00000373548 GALR1P47211 349 aa15.46■□□□□ 0.06
HDAC1-201ENST00000373548 NRGNQ92686 78 aa15.46■□□□□ 0.06
HDAC1-201ENST00000373548 RBM14Q96PK6 669 aaKnown RBP15.46■□□□□ 0.06
HDAC1-201ENST00000373548 FANCD2OSQ96PS1 177 aa15.46■□□□□ 0.06
HDAC1-201ENST00000373548 C1RLQ9NZP8 487 aa15.46■□□□□ 0.06
HDAC1-201ENST00000373548 IGLV11-55A0A075B6I3 123 aa15.45■□□□□ 0.06
HDAC1-201ENST00000373548 C9JCJ5 164 aa15.45■□□□□ 0.06
HDAC1-201ENST00000373548 EGR2P11161 476 aaPredicted RBP15.45■□□□□ 0.06
HDAC1-201ENST00000373548 CD99P14209 185 aa15.45■□□□□ 0.06
HDAC1-201ENST00000373548 TTC9CQ8N5M4 171 aa15.45■□□□□ 0.06
HDAC1-201ENST00000373548 RASL11BQ9BPW5 248 aa15.45■□□□□ 0.06
HDAC1-201ENST00000373548 OR5B12Q96R08 314 aa15.44■□□□□ 0.06
HDAC1-201ENST00000373548 FAM208BQ5VWN6 2430 aa15.44■□□□□ 0.06
HDAC1-201ENST00000373548 HLA-DRB1P01911 266 aa15.44■□□□□ 0.06
HDAC1-201ENST00000373548 HNF1AP20823 631 aa15.44■□□□□ 0.06
HDAC1-201ENST00000373548 SNRPEP62304 92 aaKnown RBP15.44■□□□□ 0.06
HDAC1-201ENST00000373548 PYGO2Q9BRQ0 406 aa15.44■□□□□ 0.06
HDAC1-201ENST00000373548 IGHV3OR16-10A0A075B7F0 116 aa15.43■□□□□ 0.06
HDAC1-201ENST00000373548 S100PP25815 95 aa15.43■□□□□ 0.06
HDAC1-201ENST00000373548 LYZP61626 148 aa15.43■□□□□ 0.06
HDAC1-201ENST00000373548 STXBP6Q8NFX7 210 aa15.43■□□□□ 0.06
HDAC1-201ENST00000373548 SFRP2Q96HF1 295 aa15.43■□□□□ 0.06
HDAC1-201ENST00000373548 HSPB9Q9BQS6 159 aa15.43■□□□□ 0.06
HDAC1-201ENST00000373548 S4R3C0 116 aa15.43■□□□□ 0.06
HDAC1-201ENST00000373548 IGHV1-69DA0A0B4J2H0 117 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms