RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ENSAO43768 121 aaKnown RBP11.27□□□□□ -0.61
LDB3-204ENST00000372066 ACTL6BO94805 426 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 SMIM6P0DI80 62 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 OR10J1P30954 320 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 RPL27AP46776 148 aaKnown RBP11.27□□□□□ -0.61
LDB3-204ENST00000372066 WT1-ASQ06250 92 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 PRSS8Q16651 343 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 ZNF343Q6P1L6 599 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 THAP8Q8NA92 274 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 C11orf52Q96A22 123 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 OR5B12Q96R08 314 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 PFDN5Q99471 154 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 SSX3Q99909 188 aa11.27□□□□□ -0.61
LDB3-204ENST00000372066 SRSF8Q9BRL6 282 aaKnown RBP11.27□□□□□ -0.61
LDB3-204ENST00000372066 LY6LH3BQJ8 138 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 AP4M1O00189 453 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 CXCL1P09341 107 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 CEACAM3P40198 252 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 ATP5G3P48201 142 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 MEOX2P50222 304 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 GNB1P62873 340 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 FAM78BQ5VT40 261 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 KIR3DL3Q8N743 410 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 OR11H6Q8NGC7 330 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 FAM210BQ96KR6 192 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 BPESC1Q9GZL8 116 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 SEPSECSQ9HD40 501 aaKnown RBP11.26□□□□□ -0.61
LDB3-204ENST00000372066 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
LDB3-204ENST00000372066 IGKV1OR2-108A0A075B7D4 117 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 A0A1W2PPI3 338 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 SRP14P37108 136 aaKnown RBP11.25□□□□□ -0.61
LDB3-204ENST00000372066 UBE2G2P60604 165 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 SNRPEP62304 92 aaKnown RBP11.25□□□□□ -0.61
LDB3-204ENST00000372066 PSG5Q15238 335 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 MRGPRG-AS1Q2M3A8 158 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 C16orf82Q7Z2V1 217 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 MOB3BQ86TA1 216 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 C22orf15Q8WYQ4 148 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 C12orf57Q99622 126 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 PYGO2Q9BRQ0 406 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 SSBP3Q9BWW4 388 aaPredicted RBP11.25□□□□□ -0.61
LDB3-204ENST00000372066 ONECUT1Q9UBC0 465 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 SIGLEC9Q9Y336 463 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 LY96Q9Y6Y9 160 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 URGCP-MRPS24S4R325 110 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 NBEAL1Q6ZS30 2694 aa11.25□□□□□ -0.61
LDB3-204ENST00000372066 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.25□□□□□ -0.61
LDB3-204ENST00000372066 TGIF2-C20orf24A0A0A6YYL0 155 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 TCRBV4S1A1TA0A5B7 111 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 NPPCP23582 126 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 AKR1D1P51857 326 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 BPIFB3P59826 476 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 IMMP2LQ96T52 175 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 LOC105371242A0A075B767 164 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 C22orf46C9J442 243 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 E7EUB6 86 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 CRYGCP07315 174 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 PFN1P07737 140 aaKnown RBP11.24□□□□□ -0.61
LDB3-204ENST00000372066 C8orf88P0DMB2 117 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 COX7A1P24310 79 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 HTR1DP28221 377 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 GALR1P47211 349 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 KIAA0141Q14154 515 aaPredicted RBP11.24□□□□□ -0.61
LDB3-204ENST00000372066 TNXAQ16473 311 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 C10orf55Q5SWW7 151 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 TPTE2P1Q5T6R2 138 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 KCNIP4Q6PIL6 250 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 MIR17HGQ75NE6 70 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 LINC01551Q86U37 167 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 PPP1R27Q86WC6 154 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 OR1P1Q8NH06 330 aa11.24□□□□□ -0.61
LDB3-204ENST00000372066 OOSP1A8MZH6 123 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 C9JCJ5 164 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 NDUFB4O95168 129 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 PRTN3P24158 256 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 RPL35P42766 123 aaKnown RBP11.23□□□□□ -0.61
LDB3-204ENST00000372066 SPATA31B1PQ5VZV4 182 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 OR51G1Q8NGK1 321 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 ACY3Q96HD9 319 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 SRD5A3Q9H8P0 318 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 TPSG1Q9NRR2 321 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 DPM3Q9P2X0 92 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 YTHDF2Q9Y5A9 579 aaKnown RBP11.23□□□□□ -0.61
LDB3-204ENST00000372066 SVEP1Q4LDE5 3571 aa11.23□□□□□ -0.61
LDB3-204ENST00000372066 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
LDB3-204ENST00000372066 A0A1W2PRE2 83 aa11.22□□□□□ -0.61
LDB3-204ENST00000372066 PSMB11A5LHX3 300 aa11.22□□□□□ -0.61
LDB3-204ENST00000372066 ODF3BA8MYP8 253 aa11.22□□□□□ -0.61
LDB3-204ENST00000372066 GPR6P46095 362 aaPredicted RBP11.22□□□□□ -0.61
LDB3-204ENST00000372066 TRGV9Q99603 122 aa11.22□□□□□ -0.61
LDB3-204ENST00000372066 SLC25A33Q9BSK2 321 aa11.22□□□□□ -0.61
LDB3-204ENST00000372066 FNDC4Q9H6D8 234 aaPredicted RBP11.22□□□□□ -0.61
LDB3-204ENST00000372066 DNAJC4Q9NNZ3 241 aa11.22□□□□□ -0.61
LDB3-204ENST00000372066 ELOA3CA0A087WX78 387 aaPredicted RBP11.21□□□□□ -0.61
LDB3-204ENST00000372066 MDFIC2A0A1B0GVS7 189 aa11.21□□□□□ -0.61
LDB3-204ENST00000372066 S100A9P06702 114 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms