RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 K7EP13 123 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 M0R1X1 148 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 IGHV1-46P01743 117 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 APCSP02743 223 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 C3orf79P0CE67 100 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 HNF1AP20823 631 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 BATFQ16520 125 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 STUMQ69YW2 141 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 Q6ZN92 141 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 ABHD12Q8N2K0 398 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 ZNF439Q8NDP4 499 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 Q8TCH9 128 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 SSMEM1Q8WWF3 244 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 BEX4Q9NWD9 120 aaPredicted RBP9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 ABCA12Q86UK0 2595 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 APCP25054 2843 aa9.29□□□□□ -0.92
TSPAN1-201ENST00000372003 IGHV2-26A0A0B4J1V2 119 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 MGST3O14880 152 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 IGHV4-39P01824 125 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 CFHR2P36980 270 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 PCP4P48539 62 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 RPS20P60866 119 aaKnown RBP9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 PSG5Q15238 335 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 MMDQ15546 238 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 SPRNQ5BIV9 151 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 IBA57Q5T440 356 aaKnown RBP9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 LEMD1Q68G75 181 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 ZNF738Q8NE65 137 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 TSKUQ8WUA8 353 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 IGF2BP2-AS1Q96M15 143 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 FAM103A1Q9BTL3 118 aaKnown RBP9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 ZNF331Q9NQX6 463 aaPredicted RBP9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 C1RLQ9NZP8 487 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 GNG12Q9UBI6 72 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 PRNDQ9UKY0 176 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 CSMD2Q7Z408 3487 aa9.28□□□□□ -0.92
TSPAN1-201ENST00000372003 TRAV9-2A0A087WT02 112 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 IGHV3-43A0A0B4J1X8 118 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 NKX6-3A6NJ46 265 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 LYNX1G3V0Z9 82 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 WNT9BO14905 357 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 TCF21O43680 179 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 FOXH1O75593 365 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 OR2J3O76001 311 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 NDUFB8O95169 186 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 CA2P00918 260 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 IGLV2-8P01709 118 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 IGHV3-43DP0DP04 118 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 LYNX1P0DP58 116 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 CRYBB3P26998 211 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 SRIP30626 198 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 EFNA4P52798 201 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 TNFAIP6P98066 277 aaPredicted RBP9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 UBE2V1Q13404 147 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 TMEM30BQ3MIR4 351 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 SPATA31B1PQ5VZV4 182 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 FAM53AQ6NSI3 398 aaPredicted RBP9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 STPG4Q8N801 248 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 NEU4Q8WWR8 484 aaPredicted RBP9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 MBD6Q96DN6 1003 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 OR2V2Q96R30 315 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 NABP2Q9BQ15 211 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 IFI27L2Q9H2X8 130 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 RNF114Q9Y508 228 aa9.27□□□□□ -0.92
TSPAN1-201ENST00000372003 CACNA1DQ01668 2161 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 AKAP6Q13023 2319 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 IGHV1-69-2A0A0G2JMI3 117 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 PMCHP20382 165 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 TNFSF4P23510 183 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 TSPOP30536 169 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 PRDX2P32119 198 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 LOXL3P58215 753 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 MIR17HGQ75NE6 70 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 GCSAMQ8N6F7 178 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 ITLN1Q8WWA0 313 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 SMIM12Q96EX1 92 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 SAP30LQ9HAJ7 183 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 PLEKHA3Q9HB20 300 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 RAI1Q7Z5J4 1906 aaPredicted RBP9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 POLQO75417 2590 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 SPG11Q96JI7 2443 aa9.27□□□□□ -0.93
TSPAN1-201ENST00000372003 PLCE1Q9P212 2302 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 C8orf88P0DMB2 117 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 USF1P22415 310 aaPredicted RBP9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 COL8A2P25067 703 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 TFPI2P48307 235 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 PTTG1IPP53801 180 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 C2orf83Q53S99 150 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 ZNF826PQ6ZT77 177 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 CD177Q8N6Q3 437 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 RFESDQ8TAC1 157 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 C18orf32Q8TCD1 76 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 GRAMD2BQ96HH9 432 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 RCHY1Q96PM5 261 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 COX11Q9Y6N1 276 aa9.26□□□□□ -0.93
TSPAN1-201ENST00000372003 FRMD6-AS1P0C7T7 363 aa9.25□□□□□ -0.93
TSPAN1-201ENST00000372003 CGB3P0DN86 165 aa9.25□□□□□ -0.93
TSPAN1-201ENST00000372003 CGB7P0DN87 165 aa9.25□□□□□ -0.93
TSPAN1-201ENST00000372003 REG1BP48304 166 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms