RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 SCRT1Q9BWW7 348 aa20.64■□□□□ 0.89
ATPAF1-202ENST00000371937 SMDT1Q9H4I9 107 aa20.64■□□□□ 0.89
ATPAF1-202ENST00000371937 VPREB3Q9UKI3 123 aa20.64■□□□□ 0.89
ATPAF1-202ENST00000371937 HMGB3O15347 200 aaKnown RBP20.63■□□□□ 0.89
ATPAF1-202ENST00000371937 PMS2P11Q13670 270 aa20.63■□□□□ 0.89
ATPAF1-202ENST00000371937 ZNF48Q96MX3 618 aaPredicted RBP20.63■□□□□ 0.89
ATPAF1-202ENST00000371937 TMEM218A2RU14 115 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 OR2J3O76001 311 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 IGLC1P0CG04 106 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 MFAP4P55083 255 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 BLCAPP62952 87 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 GATAD1Q8WUU5 269 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 LINC00052Q96N35 136 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 FBXL7Q9UJT9 491 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 FABP1P07148 127 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 KRTAP1-1Q07627 177 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 OR1L4Q8NGR5 311 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 PFDN5Q99471 154 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 RNF2Q99496 336 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 SEPSECSQ9HD40 501 aaKnown RBP20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 ZNF355PQ9NSJ1 428 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 GNG13Q9P2W3 67 aa20.62■□□□□ 0.89
ATPAF1-202ENST00000371937 ZNF469Q96JG9 3925 aaPredicted RBP20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 TRAV30A0A087WSZ9 112 aa20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 EIF3GO75821 320 aaKnown RBP eCLIP20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 NDUFB8O95169 186 aa20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 IFNA1P01562 189 aa20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 C19orf54Q5BKX5 351 aa20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 FAM78BQ5VT40 261 aa20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 VN1R17PQ8TDU5 208 aa20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 C21orf62Q9NYP8 219 aa20.61■□□□□ 0.89
ATPAF1-202ENST00000371937 TRBV9A0A0B4J1U6 114 aa20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 SRP14P37108 136 aaKnown RBP20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 HAGHQ16775 308 aa20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 DNAJC4Q9NNZ3 241 aa20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 FUT9Q9Y231 359 aa20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 AP4M1O00189 453 aa20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 STAG3L2P0CL84 134 aa20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 STAG3L3P0CL85 134 aa20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 RBMS3Q6XE24 437 aaKnown RBP20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 NECAP1Q8NC96 275 aa20.6■□□□□ 0.89
ATPAF1-202ENST00000371937 COX7A2P2O60397 106 aa20.59■□□□□ 0.89
ATPAF1-202ENST00000371937 OR5G3P0C626 314 aa20.59■□□□□ 0.89
ATPAF1-202ENST00000371937 TXN2Q99757 166 aa20.59■□□□□ 0.89
ATPAF1-202ENST00000371937 RARRES2Q99969 163 aa20.59■□□□□ 0.89
ATPAF1-202ENST00000371937 GSX1Q9H4S2 264 aaPredicted RBP20.59■□□□□ 0.89
ATPAF1-202ENST00000371937 YAE1D1Q9NRH1 226 aa20.59■□□□□ 0.89
ATPAF1-202ENST00000371937 ZFHX3Q15911 3703 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 ELOA3CA0A087WX78 387 aaPredicted RBP20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 PSMB11A5LHX3 300 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 HOXA3O43365 443 aaPredicted RBP20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 GNG7O60262 68 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 SCGB2A1O75556 95 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 CXorf1O96002 111 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 PSMB3P49720 205 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 RHOGP84095 191 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 KHDC3LQ587J8 217 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 ZNF506Q5JVG8 444 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 TMEM37Q8WXS4 190 aa20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 MRPL32Q9BYC8 188 aaKnown RBP20.58■□□□□ 0.89
ATPAF1-202ENST00000371937 TLN2Q9Y4G6 2542 aa20.58■□□□□ 0.88
ATPAF1-202ENST00000371937 IGKV1-17P01599 117 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 FCGR2BP31994 310 aaPredicted RBP20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 IL17RELQ6ZVW7 336 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 IQCF2Q8IXL9 164 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 ZNF580Q9UK33 172 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 MXRA5Q9NR99 2828 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 BCL2P10415 239 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 HNF1AP20823 631 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 TAGLN2P37802 199 aaKnown RBP20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 PPT1P50897 306 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 C15orf32Q32M92 178 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 TIGITQ495A1 244 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 Q56UQ5 140 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 C10orf113Q5VZT2 155 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 TMPRSS5Q9H3S3 457 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 LINC00527Q9UJ94 153 aa20.57■□□□□ 0.88
ATPAF1-202ENST00000371937 AKAP9Q99996 3911 aa20.56■□□□□ 0.88
ATPAF1-202ENST00000371937 LOC102723971A0A1B0GUV8 181 aa20.56■□□□□ 0.88
ATPAF1-202ENST00000371937 TAS2R45P59539 299 aa20.56■□□□□ 0.88
ATPAF1-202ENST00000371937 SPATA31B1PQ5VZV4 182 aa20.56■□□□□ 0.88
ATPAF1-202ENST00000371937 MANBALQ9NQG1 85 aa20.56■□□□□ 0.88
ATPAF1-202ENST00000371937 TECRQ9NZ01 308 aaKnown RBP20.56■□□□□ 0.88
ATPAF1-202ENST00000371937 S4R3C0 116 aa20.56■□□□□ 0.88
ATPAF1-202ENST00000371937 C9JQL5 133 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 SFTA3P0C7M3 94 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 RD3LP0DJH9 198 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 ARL14EPLP0DKL9 152 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 PSG1P11464 419 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 PLP1P60201 277 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 MIR17HGQ75NE6 70 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 H3BUA1 57 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 BRI3O95415 125 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 HSPB1P04792 205 aaKnown RBP20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 ICAM4Q14773 271 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 Q6ZS46 218 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 SIGLECL1Q8N7X8 197 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 SLC35B3Q9H1N7 401 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 DOK5Q9P104 306 aa20.55■□□□□ 0.88
ATPAF1-202ENST00000371937 VAX2Q9UIW0 290 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms