RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 YPEL2Q96QA6 119 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 VWA8A3KMH1 1905 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 TMEM164Q5U3C3 297 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 MOB3BQ86TA1 216 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 OR11H1Q8NG94 326 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 OR4F17Q8NGA8 305 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 OR11H2Q8NH07 326 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 AAMDCQ9H7C9 122 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 IGHV1OR21-1A0A087WYE8 117 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 TRAV24A0A0B4J272 114 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 MLANAQ16655 118 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 PEAR1Q5VY43 1037 aaPredicted RBP9.77□□□□□ -0.85
PTPN1-201ENST00000371621 LINC00305Q7Z4B0 112 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 C9JCJ5 164 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 LYZL6O75951 148 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 TIAF1O95411 115 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 PRSS2P07478 247 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 LOXL3P58215 753 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 ACP7Q6ZNF0 438 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 DEFB127Q9H1M4 99 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 MRPS17Q9Y2R5 130 aaKnown RBP9.76□□□□□ -0.85
PTPN1-201ENST00000371621 OR9G4Q8NGQ1 327 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FGFBP3Q8TAT2 258 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 NEUROG1Q92886 237 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 HARBI1Q96MB7 349 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 VGLL1Q99990 258 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 TMEM238LA0A1B0GVL6 79 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A10PA6NDY2 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A18PA6NE21 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A16PA6NEW6 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A20PA6NIJ5 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A8PA6NJQ4 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 A6NJY4 79 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A7PA6NKC0 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A22PA8MWA6 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A12PA8MX19 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A5PA8MXJ8 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A23PA8MXZ1 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 SMAD7O15105 426 aaKnown RBP9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A15PP0C7V4 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A13PP0C7W8 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A14PP0C7W9 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 FAM90A24PP0C7X0 464 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 COX8AP10176 69 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 SLC22A18ASQ8N1D0 253 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 OR5AN1Q8NGI8 311 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 CHCHD1Q96BP2 118 aaKnown RBP9.76□□□□□ -0.85
PTPN1-201ENST00000371621 COQ2Q96H96 371 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 TTTY13Q9BZ97 58 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 MYO15AQ9UKN7 3530 aa9.76□□□□□ -0.85
PTPN1-201ENST00000371621 PSMB11A5LHX3 300 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 SPRY3O43610 288 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 MYOD1P15172 320 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 GAB4Q2WGN9 574 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 GPR82Q96P67 336 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 PCNX3Q9H6A9 2034 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 LMO7DNF2Z398 122 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 SYNGR3O43761 229 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 NCR2O95944 276 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 PAX1P15863 534 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 HOXA4Q00056 320 aaPredicted RBP9.75□□□□□ -0.85
PTPN1-201ENST00000371621 PCP2Q8IVA1 136 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 FLVCR1-AS1Q8TAF5 88 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 PLSCR4Q9NRQ2 329 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 DECR2Q9NUI1 292 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 TRAV3A0A0B4J244 114 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 IFI6P09912 130 aa9.75□□□□□ -0.85
PTPN1-201ENST00000371621 S100A4P26447 101 aaKnown RBP9.75□□□□□ -0.85
PTPN1-201ENST00000371621 TMEM189A5PLL7 270 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 C15orf62A8K5M9 175 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 CD27P26842 260 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 LYPD6Q86Y78 171 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 VKORC1Q9BQB6 163 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 NPIPB13A6NJU9 1138 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 NPIPB4C9JG80 1138 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 TSPAN13O95857 204 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 SRD5A2P31213 254 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 CTRLP40313 264 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 SPATA12Q7Z6I5 190 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 SVIPQ8NHG7 77 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 NDFIP1Q9BT67 221 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 PRRC2CQ9Y520 2896 aaKnown RBP9.74□□□□□ -0.85
PTPN1-201ENST00000371621 A0A1W2PQF6 199 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 F2RL2O00254 374 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 ACP1P24666 158 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 IFI27P40305 119 aaPredicted RBP9.74□□□□□ -0.85
PTPN1-201ENST00000371621 C3orf36Q3SXR2 165 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 ZC2HC1BQ5TFG8 222 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 TMEM178AQ8NBL3 297 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 CFHR5Q9BXR6 569 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 C1RLQ9NZP8 487 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 ZNF256Q9Y2P7 627 aaPredicted RBP9.74□□□□□ -0.85
PTPN1-201ENST00000371621 FRMPD3Q5JV73 1810 aa9.74□□□□□ -0.85
PTPN1-201ENST00000371621 AREGP15514 252 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 HES1Q14469 280 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 SRXN1Q9BYN0 137 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 INSIG2Q9Y5U4 225 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 IGHV3-72A0A0B4J1Y9 119 aa9.73□□□□□ -0.85
PTPN1-201ENST00000371621 ERVK11-1P61568 191 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms