RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 RNASE7Q9H1E1 156 aaKnown RBP23.15■■□□□ 1.3
SSBP3-204ENST00000371320 FBXL15Q9H469 300 aa23.15■■□□□ 1.3
SSBP3-204ENST00000371320 OSTCQ9NRP0 149 aa23.15■■□□□ 1.3
SSBP3-204ENST00000371320 TPRP12270 2363 aaKnown RBP23.15■■□□□ 1.3
SSBP3-204ENST00000371320 TRAV20A0A0B4J274 112 aa23.15■■□□□ 1.3
SSBP3-204ENST00000371320 ORM2P19652 201 aa23.15■■□□□ 1.3
SSBP3-204ENST00000371320 LY6G5BQ8NDX9 201 aa23.15■■□□□ 1.3
SSBP3-204ENST00000371320 LY6LH3BQJ8 138 aa23.14■■□□□ 1.29
SSBP3-204ENST00000371320 CORTO00230 105 aa23.14■■□□□ 1.29
SSBP3-204ENST00000371320 IGLV2-8P01709 118 aa23.14■■□□□ 1.29
SSBP3-204ENST00000371320 CBLN1P23435 193 aa23.14■■□□□ 1.29
SSBP3-204ENST00000371320 SSX2Q16385 188 aa23.14■■□□□ 1.29
SSBP3-204ENST00000371320 TMEM116Q8NCL8 245 aa23.14■■□□□ 1.29
SSBP3-204ENST00000371320 MGST1P10620 155 aaKnown RBP23.13■■□□□ 1.29
SSBP3-204ENST00000371320 OR1L6Q8NGR2 347 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 OR1B1Q8NGR6 318 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 OR5R1Q8NH85 324 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 FXYD5Q96DB9 178 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 PERPQ96FX8 193 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 IGHV3-21A0A0B4J1V1 117 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 TEX22C9J3V5 150 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 ISLRO14498 428 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 TAS2R60P59551 318 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 ZNF329Q86UD4 541 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 OR8I2Q8N0Y5 310 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 TIMD4Q96H15 378 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 CDC42EP3Q9UKI2 254 aa23.13■■□□□ 1.29
SSBP3-204ENST00000371320 F11RQ9Y624 299 aaKnown RBP23.13■■□□□ 1.29
SSBP3-204ENST00000371320 GBGT1Q8N5D6 347 aa23.12■■□□□ 1.29
SSBP3-204ENST00000371320 RNF5Q99942 180 aa23.12■■□□□ 1.29
SSBP3-204ENST00000371320 CBLN4Q9NTU7 201 aa23.12■■□□□ 1.29
SSBP3-204ENST00000371320 PLGLAQ15195 96 aa23.12■■□□□ 1.29
SSBP3-204ENST00000371320 STXBP6Q8NFX7 210 aa23.12■■□□□ 1.29
SSBP3-204ENST00000371320 GZMBP10144 247 aa23.11■■□□□ 1.29
SSBP3-204ENST00000371320 FXYD3Q14802 87 aa23.11■■□□□ 1.29
SSBP3-204ENST00000371320 LINC00479Q96M42 142 aa23.11■■□□□ 1.29
SSBP3-204ENST00000371320 MRPL18Q9H0U6 180 aaKnown RBP23.11■■□□□ 1.29
SSBP3-204ENST00000371320 C9orf152Q5JTZ5 239 aa23.1■■□□□ 1.29
SSBP3-204ENST00000371320 SRSF12Q8WXF0 261 aaKnown RBP23.1■■□□□ 1.29
SSBP3-204ENST00000371320 ABCA4P78363 2273 aa23.1■■□□□ 1.29
SSBP3-204ENST00000371320 IER3P46695 156 aa23.1■■□□□ 1.29
SSBP3-204ENST00000371320 IBA57Q5T440 356 aaKnown RBP23.1■■□□□ 1.29
SSBP3-204ENST00000371320 FCN1O00602 326 aa23.09■■□□□ 1.29
SSBP3-204ENST00000371320 PEX7O00628 323 aa23.09■■□□□ 1.29
SSBP3-204ENST00000371320 ARF6P62330 175 aa23.09■■□□□ 1.29
SSBP3-204ENST00000371320 PAX2Q02962 417 aa23.09■■□□□ 1.29
SSBP3-204ENST00000371320 TPTE2P1Q5T6R2 138 aa23.09■■□□□ 1.29
SSBP3-204ENST00000371320 TIMM23O14925 209 aa23.09■■□□□ 1.29
SSBP3-204ENST00000371320 TMEM256Q8N2U0 113 aa23.09■■□□□ 1.29
SSBP3-204ENST00000371320 A0A1B0GUS0 222 aa23.08■■□□□ 1.29
SSBP3-204ENST00000371320 HYPMO75409 117 aa23.08■■□□□ 1.29
SSBP3-204ENST00000371320 SNRPCP09234 159 aaKnown RBP23.08■■□□□ 1.29
SSBP3-204ENST00000371320 HTR1DP28221 377 aa23.08■■□□□ 1.29
SSBP3-204ENST00000371320 RPL19P84098 196 aaKnown RBP23.08■■□□□ 1.29
SSBP3-204ENST00000371320 LDLRAD2Q5SZI1 272 aa23.08■■□□□ 1.29
SSBP3-204ENST00000371320 NHLRC2Q8NBF2 726 aa23.08■■□□□ 1.29
SSBP3-204ENST00000371320 SERTAD4Q9NUC0 356 aa23.07■■□□□ 1.28
SSBP3-204ENST00000371320 FRMD6-AS1P0C7T7 363 aa23.07■■□□□ 1.28
SSBP3-204ENST00000371320 RANP62826 216 aaKnown RBP23.07■■□□□ 1.28
SSBP3-204ENST00000371320 CX3CL1P78423 397 aa23.07■■□□□ 1.28
SSBP3-204ENST00000371320 C11orf71Q6IPW1 123 aa23.07■■□□□ 1.28
SSBP3-204ENST00000371320 TRBV9A0A0B4J1U6 114 aa23.06■■□□□ 1.28
SSBP3-204ENST00000371320 GRIFINA4D1Z8 144 aa23.06■■□□□ 1.28
SSBP3-204ENST00000371320 SNURFLB1AK76 121 aa23.06■■□□□ 1.28
SSBP3-204ENST00000371320 DPM3Q9P2X0 92 aa23.06■■□□□ 1.28
SSBP3-204ENST00000371320 LRBAP50851 2863 aa23.06■■□□□ 1.28
SSBP3-204ENST00000371320 RELNP78509 3460 aa23.06■■□□□ 1.28
SSBP3-204ENST00000371320 SPTBN4Q9H254 2564 aa23.06■■□□□ 1.28
SSBP3-204ENST00000371320 LHFPL4Q7Z7J7 247 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 OR11H6Q8NGC7 330 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 BLNKQ8WV28 456 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 NEU4Q8WWR8 484 aaPredicted RBP23.05■■□□□ 1.28
SSBP3-204ENST00000371320 GNB1LQ9BYB4 327 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 GSX1Q9H4S2 264 aaPredicted RBP23.05■■□□□ 1.28
SSBP3-204ENST00000371320 CNIH1O95406 144 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 TCL1AP56279 114 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 PKIAP61925 76 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 MMDQ15546 238 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 BAGE2Q86Y30 109 aa23.05■■□□□ 1.28
SSBP3-204ENST00000371320 TRAV34A0A0B4J273 112 aa23.04■■□□□ 1.28
SSBP3-204ENST00000371320 SPINK4O60575 86 aa23.04■■□□□ 1.28
SSBP3-204ENST00000371320 MYCNOSP40205 109 aa23.04■■□□□ 1.28
SSBP3-204ENST00000371320 HILPDAQ9Y5L2 63 aa23.04■■□□□ 1.28
SSBP3-204ENST00000371320 LOC105371242A0A075B767 164 aa23.04■■□□□ 1.28
SSBP3-204ENST00000371320 ZNF705GA8MUZ8 300 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-204ENST00000371320 SSBP3Q9BWW4 388 aaPredicted RBP23.04■■□□□ 1.28
SSBP3-204ENST00000371320 NUPR1O60356 82 aa23.03■■□□□ 1.28
SSBP3-204ENST00000371320 CRISP2P16562 243 aa23.03■■□□□ 1.28
SSBP3-204ENST00000371320 PLP1P60201 277 aa23.03■■□□□ 1.28
SSBP3-204ENST00000371320 SRSF8Q9BRL6 282 aaKnown RBP23.03■■□□□ 1.28
SSBP3-204ENST00000371320 NBASA2RRP1 2371 aa23.03■■□□□ 1.28
SSBP3-204ENST00000371320 SMIM27A0A1W2PRY6 76 aa23.02■■□□□ 1.28
SSBP3-204ENST00000371320 TSTD3H0UI37 97 aa23.02■■□□□ 1.28
SSBP3-204ENST00000371320 NBEAP1P0C6P0 100 aa23.02■■□□□ 1.28
SSBP3-204ENST00000371320 CEACAM3P40198 252 aa23.02■■□□□ 1.28
SSBP3-204ENST00000371320 FAM209BQ5JX69 171 aa23.02■■□□□ 1.28
SSBP3-204ENST00000371320 WNT10AQ9GZT5 417 aa23.02■■□□□ 1.28
SSBP3-204ENST00000371320 EPDR1Q9UM22 224 aa23.02■■□□□ 1.28
SSBP3-204ENST00000371320 I3L2K1 104 aa23.02■■□□□ 1.28
SSBP3-204ENST00000371320 M0R1W7 72 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms