RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 TIGITQ495A1 244 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 MZT2BQ6NZ67 158 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 TOMM20LQ6UXN7 152 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 OR4D5Q8NGN0 318 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 RNASEH2CQ8TDP1 164 aaKnown RBP11.37□□□□□ -0.59
SS18L1-202ENST00000370848 OR10C1Q96KK4 312 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 ZFAND3Q9H8U3 227 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 MRPL27Q9P0M9 148 aaKnown RBP11.37□□□□□ -0.59
SS18L1-202ENST00000370848 U3KQ87 197 aa11.37□□□□□ -0.59
SS18L1-202ENST00000370848 IGHV3OR16-13A0A075B7E8 117 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 IGHV3-74A0A0B4J1X5 117 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 RPS10-NUDT3A0A1W2PQS6 291 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 WRBO00258 174 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 SYNGR2O43760 224 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 SCAF4O95104 1147 aaKnown RBP11.36□□□□□ -0.59
SS18L1-202ENST00000370848 IGKV1-17P01599 117 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 CD7P09564 240 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 POLR2GP62487 172 aaKnown RBP eCLIP11.36□□□□□ -0.59
SS18L1-202ENST00000370848 HAGHQ16775 308 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 SLC16A13Q7RTY0 426 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 ZNF431Q8TF32 576 aaPredicted RBP11.36□□□□□ -0.59
SS18L1-202ENST00000370848 MARC2Q969Z3 335 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 WFDC10AQ9H1F0 79 aa11.36□□□□□ -0.59
SS18L1-202ENST00000370848 PAIP2BQ9ULR5 123 aaKnown RBP11.36□□□□□ -0.59
SS18L1-202ENST00000370848 PUS1Q9Y606 427 aaKnown RBP eCLIP11.36□□□□□ -0.59
SS18L1-202ENST00000370848 H3BP45 60 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 IFNA21P01568 189 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 IFNA4P05014 189 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 IGLC1P0CG04 106 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 IAH1Q2TAA2 248 aaPredicted RBP11.35□□□□□ -0.59
SS18L1-202ENST00000370848 ZNF600Q6ZNG1 722 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 ENKURQ8TC29 256 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 NPIPB3Q92617 1050 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 ACY3Q96HD9 319 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
SS18L1-202ENST00000370848 IGHV7-4-1A0A0J9YVY3 117 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 K7EMT4 169 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 MED6O75586 246 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 SCGB1D2O95969 90 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 APOHP02749 345 aaPredicted RBP11.34□□□□□ -0.59
SS18L1-202ENST00000370848 SLC25A4P12235 298 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 CD81P60033 236 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 ID3Q02535 119 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 NRARPQ7Z6K4 114 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 ZBTB8BQ8NAP8 495 aaPredicted RBP11.34□□□□□ -0.59
SS18L1-202ENST00000370848 SMPXQ9UHP9 88 aa11.34□□□□□ -0.59
SS18L1-202ENST00000370848 IGHV3-66A0A0C4DH42 116 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 CHEK1O14757 476 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 SSSCA1O60232 199 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 OR10J1P30954 320 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 NKX2-1P43699 371 aaPredicted RBP11.33□□□□□ -0.6
SS18L1-202ENST00000370848 SPANXN5Q5MJ07 72 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 NOXA1Q86UR1 476 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 LILRB2Q8N423 598 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 C12orf45Q8N5I9 185 aaPredicted RBP11.33□□□□□ -0.6
SS18L1-202ENST00000370848 TMEM116Q8NCL8 245 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 RNF2Q99496 336 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 NEURL2Q9BR09 285 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 RHPN1-AS1Q9BWJ2 59 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 GSKIPQ9P0R6 139 aa11.33□□□□□ -0.6
SS18L1-202ENST00000370848 TRAV14DV4A0A0A6YYC5 116 aa11.32□□□□□ -0.6
SS18L1-202ENST00000370848 FAM25EA8MYX2 175 aa11.32□□□□□ -0.6
SS18L1-202ENST00000370848 PRSS46E5RG02 174 aa11.32□□□□□ -0.6
SS18L1-202ENST00000370848 GAMTQ14353 236 aa11.32□□□□□ -0.6
SS18L1-202ENST00000370848 ETFRF1Q6IPR1 90 aa11.32□□□□□ -0.6
SS18L1-202ENST00000370848 RBPMS2Q6ZRY4 209 aaKnown RBP11.32□□□□□ -0.6
SS18L1-202ENST00000370848 DEFB125Q8N687 156 aa11.32□□□□□ -0.6
SS18L1-202ENST00000370848 OR1S2Q8NGQ3 325 aa11.32□□□□□ -0.6
SS18L1-202ENST00000370848 ST8SIA2Q92186 375 aa11.32□□□□□ -0.6
SS18L1-202ENST00000370848 CIB3Q96Q77 187 aaPredicted RBP11.32□□□□□ -0.6
SS18L1-202ENST00000370848 RCL1Q9Y2P8 373 aaKnown RBP11.32□□□□□ -0.6
SS18L1-202ENST00000370848 IGKV1D-37A0A075B6S9 117 aa11.31□□□□□ -0.6
SS18L1-202ENST00000370848 CCNKO75909 580 aa11.31□□□□□ -0.6
SS18L1-202ENST00000370848 IL5P05113 134 aa11.31□□□□□ -0.6
SS18L1-202ENST00000370848 PAX9P55771 341 aa11.31□□□□□ -0.6
SS18L1-202ENST00000370848 RAB11AP62491 216 aa11.31□□□□□ -0.6
SS18L1-202ENST00000370848 PSENENQ9NZ42 101 aa11.31□□□□□ -0.6
SS18L1-202ENST00000370848 IGKV3-7A0A075B6H7 116 aa11.3□□□□□ -0.6
SS18L1-202ENST00000370848 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
SS18L1-202ENST00000370848 TRAV25A0A0B4J276 109 aa11.3□□□□□ -0.6
SS18L1-202ENST00000370848 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
SS18L1-202ENST00000370848 GPX4P36969 197 aaPredicted RBP11.3□□□□□ -0.6
SS18L1-202ENST00000370848 ATP5IP56385 69 aaPredicted RBP11.3□□□□□ -0.6
SS18L1-202ENST00000370848 SLC35E1Q96K37 410 aa11.3□□□□□ -0.6
SS18L1-202ENST00000370848 GINS3Q9BRX5 216 aa11.3□□□□□ -0.6
SS18L1-202ENST00000370848 STRAPQ9Y3F4 350 aaKnown RBP11.3□□□□□ -0.6
SS18L1-202ENST00000370848 C5orf51A6NDU8 294 aa11.29□□□□□ -0.6
SS18L1-202ENST00000370848 INMT-MINDY4F8WBC2 141 aa11.29□□□□□ -0.6
SS18L1-202ENST00000370848 TSPAN4O14817 238 aa11.29□□□□□ -0.6
SS18L1-202ENST00000370848 SCGB2A1O75556 95 aa11.29□□□□□ -0.6
SS18L1-202ENST00000370848 YPEL3P61236 119 aaPredicted RBP11.29□□□□□ -0.6
SS18L1-202ENST00000370848 ZNF90Q03938 601 aa11.29□□□□□ -0.6
SS18L1-202ENST00000370848 USF2Q15853 346 aaPredicted RBP11.29□□□□□ -0.6
SS18L1-202ENST00000370848 ZFAND6Q6FIF0 208 aa11.29□□□□□ -0.6
SS18L1-202ENST00000370848 VSIRQ9H7M9 311 aa11.29□□□□□ -0.6
SS18L1-202ENST00000370848 UBQLN2Q9UHD9 624 aa11.29□□□□□ -0.6
SS18L1-202ENST00000370848 IGKV1OR2-108A0A075B7D4 117 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 PMS2P5A8MQ11 134 aa11.28□□□□□ -0.6
SS18L1-202ENST00000370848 OR11H12B2RN74 326 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms