RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 Q6ZWC4 215 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 CHAC1Q9BUX1 264 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 NLRC5Q86WI3 1866 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 ACACAQ13085 2346 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 TRAV8-3A0A0A6YYJ7 113 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 A0A1W2PS18 150 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 LMO7DNF2Z398 122 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 H3BRM9 83 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 M0R2P5 195 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 PYYP10082 97 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 NPC2P61916 151 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 HGFACQ04756 655 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 CIARTQ8N365 385 aaPredicted RBP7.2□□□□□ -1.26
LCA5-201ENST00000369846 RAB1CQ92928 201 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 H3BMG7 143 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 SMAD7O15105 426 aaKnown RBP7.2□□□□□ -1.26
LCA5-201ENST00000369846 SS18L1O75177 396 aaPredicted RBP7.2□□□□□ -1.26
LCA5-201ENST00000369846 FAM90A2PQ658T7 463 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 CFAP161Q6P656 301 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 PPDPFLQ8WWR9 84 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 METTL26Q96S19 204 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 CCL13Q99616 98 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 A0A1B0GW64 132 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 K7EP34 96 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 ZP4Q12836 540 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 ARPC1AQ92747 370 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 CHTOPQ9Y3Y2 248 aaKnown RBP7.2□□□□□ -1.26
LCA5-201ENST00000369846 KLF2Q9Y5W3 355 aaPredicted RBP7.2□□□□□ -1.26
LCA5-201ENST00000369846 PLXND1Q9Y4D7 1925 aa7.2□□□□□ -1.26
LCA5-201ENST00000369846 COL6A6A6NMZ7 2263 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 IGKV1D-42A0A075B6H8 117 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 IGHV3-49A0A0A0MS15 119 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 CELA2BP08218 269 aaPredicted RBP7.19□□□□□ -1.26
LCA5-201ENST00000369846 PMVKQ15126 192 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 RNF182Q8N6D2 247 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 IFI27L2Q9H2X8 130 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 YAE1D1Q9NRH1 226 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 PILRBQ9UKJ0 227 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 MUC6Q6W4X9 2439 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 TRAV1-1A0A0B4J248 108 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 IGKV1D-13A0A0B4J2D9 117 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 LILRA1O75019 489 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 PFN1P07737 140 aaKnown RBP7.19□□□□□ -1.26
LCA5-201ENST00000369846 IGKV1-13P0DP09 117 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 CNTFRP26992 372 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 CRYBA4P53673 196 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 SUPT4H1P63272 117 aaKnown RBP7.19□□□□□ -1.26
LCA5-201ENST00000369846 FOXC1Q12948 553 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 GUSBP11Q6P575 273 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 PPP1R27Q86WC6 154 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 C9orf40Q8IXQ3 194 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 COX14Q96I36 57 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 LRRK1Q38SD2 2015 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 MYOFQ9NZM1 2061 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 IGHV3OR16-8A0A075B7F1 116 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 CCL3P10147 92 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 GAS1P54826 345 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 RPL39P5Q59GN2 51 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 LHX8Q68G74 356 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 MDP1Q86V88 176 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 C18orf12Q96KH6 178 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 Q9H3A6 140 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 S4R3C0 116 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 IGHV3OR16-12A0A075B7B8 117 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 IGKV1D-8A0A087WSZ0 117 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 TEX48A0A1B0GUV7 120 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 FOXH1O75593 365 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 IGKV3-20P01619 116 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 SLC25A47Q6Q0C1 308 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 CALYQ9NYX4 217 aa7.19□□□□□ -1.26
LCA5-201ENST00000369846 FREM3P0C091 2139 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 TM4SF4P48230 202 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 ZNF146Q15072 292 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 TEX45Q8NA69 505 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 CCL8P80075 99 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 EFNB3Q15768 340 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 S100A7L2Q5SY68 101 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 CDCP2Q5VXM1 449 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 SPINK14Q6IE38 97 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 FAM159AQ6UWV7 190 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 TMEM171Q8WVE6 324 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 FMC1Q96HJ9 113 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 GFI1Q99684 422 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 MRPL27Q9P0M9 148 aaKnown RBP7.18□□□□□ -1.26
LCA5-201ENST00000369846 D6R8Y8 96 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 GFRA3O60609 400 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 ID1P41134 155 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 SRSF1Q07955 248 aaKnown RBP eCLIP7.18□□□□□ -1.26
LCA5-201ENST00000369846 PRSS57Q6UWY2 283 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 C3orf56Q8N813 242 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 MESP1Q9BRJ9 268 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 C1QTNF5Q9BXJ0 243 aa7.18□□□□□ -1.26
LCA5-201ENST00000369846 F8W1H4 67 aa7.17□□□□□ -1.26
LCA5-201ENST00000369846 F2RL2O00254 374 aa7.17□□□□□ -1.26
LCA5-201ENST00000369846 EBLN2Q6P2I7 272 aa7.17□□□□□ -1.26
LCA5-201ENST00000369846 DEFB104AQ8WTQ1 72 aa7.17□□□□□ -1.26
LCA5-201ENST00000369846 DDB2Q92466 427 aa7.17□□□□□ -1.26
LCA5-201ENST00000369846 CFHR5Q9BXR6 569 aa7.17□□□□□ -1.26
LCA5-201ENST00000369846 MYO18BQ8IUG5 2567 aa7.17□□□□□ -1.26
LCA5-201ENST00000369846 CDX4O14627 284 aaPredicted RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms