RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 MED13LQ71F56 2210 aa4.13□□□□□ -1.75
UBE3D-202ENST00000369746 MEGF11A6BM72 1044 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM262E9PQX1 116 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 FCN1O00602 326 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 PLAUP00749 431 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 APOA2P02652 100 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 ADMP35318 185 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 DSCR9P59020 149 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 GFRALQ6UXV0 394 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 Q6ZS49 121 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 SLC25A48Q6ZT89 311 aaKnown RBP4.12□□□□□ -1.75
UBE3D-202ENST00000369746 FAM57BQ71RH2 274 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 BAGE3Q86Y29 109 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 BAGE2Q86Y30 109 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 CLECL1Q8IZS7 167 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 VKORC1L1Q8N0U8 176 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 METTL27Q8N6F8 245 aaPredicted RBP4.12□□□□□ -1.75
UBE3D-202ENST00000369746 OR10G8Q8NGN5 311 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 LSM10Q969L4 123 aaKnown RBP4.12□□□□□ -1.75
UBE3D-202ENST00000369746 SPCS1Q9Y6A9 102 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 CFAP47Q6ZTR5 3102 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF816-ZNF321PA0A0X1KG74 233 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 DHRS3O75911 302 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 ZFAND5O76080 213 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 NUDT14O95848 222 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 MYOD1P15172 320 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 IGLL1P15814 213 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 ORM2P19652 201 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 LOXP28300 417 aaPredicted RBP4.12□□□□□ -1.75
UBE3D-202ENST00000369746 GPR183P32249 361 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 TNP2Q05952 138 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 C19orf54Q5BKX5 351 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 FNDC7Q5VTL7 733 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 FRG2Q64ET8 278 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 C1QL2Q7Z5L3 287 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 LHFPL1Q86WI0 220 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 FBXL14Q8N1E6 418 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM230Q96A57 120 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 FAM3DQ96BQ1 224 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 FRG2BQ96QU4 278 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 SMIM7Q9BQ49 75 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 TXNDC17Q9BRA2 123 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 PRSS22Q9GZN4 317 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 HEBP2Q9Y5Z4 205 aa4.12□□□□□ -1.75
UBE3D-202ENST00000369746 NUP214P35658 2090 aaPredicted RBP4.12□□□□□ -1.75
UBE3D-202ENST00000369746 PDZD2O15018 2839 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 CHEK1O14757 476 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 LY6G6DO95868 133 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 CA2P00918 260 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 SLC25A6P12236 298 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 RPL27P61353 136 aaKnown RBP4.11□□□□□ -1.75
UBE3D-202ENST00000369746 SLC38A11Q08AI6 406 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 FOXI1Q12951 378 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 ANXA2RQ3ZCQ2 193 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 Q6ZUT4 128 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 NPWQ8N729 165 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 IGFBPL1Q8WX77 278 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 S1PR3Q99500 378 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 VGLL1Q99990 258 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 SFXN3Q9BWM7 321 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 TMEM222Q9H0R3 208 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 PLEKHF2Q9H8W4 249 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 SCRT2Q9NQ03 307 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 CLCF1Q9UBD9 225 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 POLR1DQ9Y2S0 133 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 ZZEF1O43149 2961 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 SPTBN2O15020 2390 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 PIGBOS1A0A0B4J2F0 54 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.11□□□□□ -1.75
UBE3D-202ENST00000369746 CXCL13O43927 109 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 GYPAP02724 150 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 FOLR3P41439 243 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 HSPE1P61604 102 aaKnown RBP4.11□□□□□ -1.75
UBE3D-202ENST00000369746 SUPT4H1P63272 117 aaKnown RBP4.11□□□□□ -1.75
UBE3D-202ENST00000369746 SERF2P84101 59 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 OR1C1Q15619 314 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 PRR22Q8IZ63 422 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 FAM57AQ8TBR7 257 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 EEF1AKMT3Q96AZ1 226 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF501Q96CX3 271 aaPredicted RBP4.11□□□□□ -1.75
UBE3D-202ENST00000369746 TM2D2Q9BX73 214 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 PARP12Q9H0J9 701 aaKnown RBP4.11□□□□□ -1.75
UBE3D-202ENST00000369746 C11orf1Q9H5F2 150 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 DUSP13Q9UII6 198 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 TEX15Q9BXT5 2789 aa4.11□□□□□ -1.75
UBE3D-202ENST00000369746 RIIAD1A6NNX1 92 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 FAM90A26D6RGX4 464 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 PGLYRP1O75594 196 aaPredicted RBP4.1□□□□□ -1.75
UBE3D-202ENST00000369746 CD55P08174 381 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 NHLRC4P0CG21 123 aaPredicted RBP4.1□□□□□ -1.75
UBE3D-202ENST00000369746 MDKP21741 143 aaPredicted RBP4.1□□□□□ -1.75
UBE3D-202ENST00000369746 VDAC1P21796 283 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 RBMXP38159 391 aaKnown RBP4.1□□□□□ -1.75
UBE3D-202ENST00000369746 POU3F1Q03052 451 aaPredicted RBP4.1□□□□□ -1.75
UBE3D-202ENST00000369746 Q0VFX4 171 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 CATR1Q13166 79 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 ZNF146Q15072 292 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 PMVKQ15126 192 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 SHISA6Q6ZSJ9 500 aa4.1□□□□□ -1.75
UBE3D-202ENST00000369746 OR2M3Q8NG83 312 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms