RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 DNAJC30Q96LL9 226 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 TNRC6AQ8NDV7 1962 aaKnown RBP8.67□□□□□ -1.02
PRDM1-201ENST00000369089 CACNA1EQ15878 2313 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 WDR90Q96KV7 1748 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 KLF5Q13887 457 aaPredicted RBP8.67□□□□□ -1.02
PRDM1-201ENST00000369089 PRNDQ9UKY0 176 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 LYPD3O95274 346 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 QRFPP83859 136 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 TMEM170BQ5T4T1 132 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 DEFA4P12838 97 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 GUSBP11Q6P575 273 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 LCNL1Q6ZST4 164 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 AMN1Q8IY45 258 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 CNEP1R1Q8N9A8 125 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 VKORC1Q9BQB6 163 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 ANAPC10Q9UM13 185 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 IL11P20809 199 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 PRSS12P56730 875 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 GLMPQ8WWB7 406 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 RGPD3A6NKT7 1758 aaPredicted RBP8.66□□□□□ -1.02
PRDM1-201ENST00000369089 DEFB108AA8MXU0 73 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 AREGP15514 252 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 FGF12P61328 243 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 MBNL2Q5VZF2 373 aaKnown RBP8.66□□□□□ -1.02
PRDM1-201ENST00000369089 TMEM14EPQ6UXP3 125 aa8.66□□□□□ -1.02
PRDM1-201ENST00000369089 SPTBN2O15020 2390 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 NPIPB6E9PJ23 425 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 SLC25A20O43772 301 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 IGKV1D-16P01601 117 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 B4GALT1P15291 398 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 TFF2Q03403 129 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 RFESDQ8TAC1 157 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 LIME1Q9H400 295 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 OTOFQ9HC10 1997 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 SVILO95425 2214 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 MYO16Q9Y6X6 1858 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 LINC01549A6NIU2 74 aa8.65□□□□□ -1.02
PRDM1-201ENST00000369089 S100A4P26447 101 aaKnown RBP8.65□□□□□ -1.02
PRDM1-201ENST00000369089 CENPVQ7Z7K6 275 aaPredicted RBP8.65□□□□□ -1.02
PRDM1-201ENST00000369089 IGHV4-34P06331 123 aa8.65□□□□□ -1.03
PRDM1-201ENST00000369089 SRSF2Q01130 221 aaKnown RBP8.65□□□□□ -1.03
PRDM1-201ENST00000369089 LINC00114Q6XXX2 140 aa8.65□□□□□ -1.03
PRDM1-201ENST00000369089 ZNF488Q96MN9 340 aa8.65□□□□□ -1.03
PRDM1-201ENST00000369089 ARRDC1-AS1Q9H2J1 176 aa8.65□□□□□ -1.03
PRDM1-201ENST00000369089 LCTP09848 1927 aa8.65□□□□□ -1.03
PRDM1-201ENST00000369089 EFNB3Q15768 340 aa8.65□□□□□ -1.03
PRDM1-201ENST00000369089 TMEM54Q969K7 222 aa8.65□□□□□ -1.03
PRDM1-201ENST00000369089 OR11H6Q8NGC7 330 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 VPREB3Q9UKI3 123 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 ABHD12Q8N2K0 398 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 FMC1Q96HJ9 113 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 LOXL2Q9Y4K0 774 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 CEP250Q9BV73 2442 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 EP300Q09472 2414 aaPredicted RBP8.64□□□□□ -1.03
PRDM1-201ENST00000369089 TNFSF14O43557 240 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 FOXC1Q12948 553 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 SLC25A48Q6ZT89 311 aaKnown RBP8.64□□□□□ -1.03
PRDM1-201ENST00000369089 CRIPAKQ8N1N5 446 aa8.64□□□□□ -1.03
PRDM1-201ENST00000369089 C11orf68Q9H3H3 251 aaKnown RBP8.64□□□□□ -1.03
PRDM1-201ENST00000369089 IGHV3-43A0A0B4J1X8 118 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 CCDC179H3BU77 68 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 IGHV3-43DP0DP04 118 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 LRRC75A-AS1Q8N1F1 130 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 DRAM1Q8N682 238 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 PKIGQ9Y2B9 76 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 LHFPL6Q9Y693 200 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 YLPM1P49750 1951 aaKnown RBP8.63□□□□□ -1.03
PRDM1-201ENST00000369089 SMIM27A0A1W2PRY6 76 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 ZNF32P17041 273 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 ACP1P24666 158 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 LYZP61626 148 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 RLFQ13129 1914 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 IGKV1D-13A0A0B4J2D9 117 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 EPOPA6NHQ4 379 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 IGKV1-13P0DP09 117 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 UFSP1Q6NVU6 142 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 NABP1Q96AH0 204 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 PLPPR2Q96GM1 343 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 JMJD8Q96S16 334 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 C1RLQ9NZP8 487 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 CSDC2Q9Y534 153 aaKnown RBP8.63□□□□□ -1.03
PRDM1-201ENST00000369089 DNAJC13O75165 2243 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 PEBP1P30086 187 aaKnown RBP8.63□□□□□ -1.03
PRDM1-201ENST00000369089 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 TEX45Q8NA69 505 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 TMEM52Q8NDY8 209 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 KLK15Q9H2R5 256 aa8.63□□□□□ -1.03
PRDM1-201ENST00000369089 TRBV20OR9-2A0A075B6H5 130 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 TCRBV4S1A1TA0A5B7 111 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 LIPT2A6NK58 231 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 IGHV3-9P01782 118 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 WNT2P09544 360 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 A0A1W2PQD3 144 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 ZIC3O60481 467 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 CCL11P51671 97 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
PRDM1-201ENST00000369089 NEU4Q8WWR8 484 aaPredicted RBP8.62□□□□□ -1.03
PRDM1-201ENST00000369089 SCGB3A1Q96QR1 104 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 DECR2Q9NUI1 292 aa8.62□□□□□ -1.03
PRDM1-201ENST00000369089 TCF19Q9Y242 345 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms