RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 RBFOX2O43251 390 aaKnown RBP eCLIP8.65□□□□□ -1.03
TPM3-212ENST00000368533 P0C879 139 aa8.65□□□□□ -1.03
TPM3-212ENST00000368533 HTD2P86397 168 aa8.65□□□□□ -1.03
TPM3-212ENST00000368533 MIC13Q5XKP0 118 aa8.65□□□□□ -1.03
TPM3-212ENST00000368533 LINC01551Q86U37 167 aa8.65□□□□□ -1.03
TPM3-212ENST00000368533 ENY2Q9NPA8 101 aa8.65□□□□□ -1.03
TPM3-212ENST00000368533 ONECUT1Q9UBC0 465 aa8.65□□□□□ -1.03
TPM3-212ENST00000368533 UQCR10Q9UDW1 63 aa8.65□□□□□ -1.03
TPM3-212ENST00000368533 TBL2Q9Y4P3 447 aaKnown RBP8.65□□□□□ -1.03
TPM3-212ENST00000368533 IGHV2-70DA0A0C4DH43 119 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 TMEM250H0YL14 139 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 SLC17A3O00476 420 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 NDUFB4O95168 129 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 TYMSP04818 313 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 CGB3P0DN86 165 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 CGB7P0DN87 165 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 ATP5G3P48201 142 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 SLC35B1P78383 322 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 SSX8Q7RTT4 187 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 CENPVQ7Z7K6 275 aaPredicted RBP8.64□□□□□ -1.03
TPM3-212ENST00000368533 TCTEX1D1Q8N7M0 179 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 SIGLECL1Q8N7X8 197 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 HELZ2Q9BYK8 2649 aaKnown RBP8.64□□□□□ -1.03
TPM3-212ENST00000368533 IGKV1-16P04430 117 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 CTRLP40313 264 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 AMTP48728 403 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 ARF6P62330 175 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 RELBQ01201 579 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 EIF4EBP1Q13541 118 aaPredicted RBP8.64□□□□□ -1.03
TPM3-212ENST00000368533 TRAT1Q6PIZ9 186 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 TMEM140Q9NV12 185 aa8.64□□□□□ -1.03
TPM3-212ENST00000368533 UBR5O95071 2799 aaPredicted RBP8.63□□□□□ -1.03
TPM3-212ENST00000368533 TLN2Q9Y4G6 2542 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 F2RL2O00254 374 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 SAP30O75446 220 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 TOMM40O96008 361 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 SRP14P37108 136 aaKnown RBP8.63□□□□□ -1.03
TPM3-212ENST00000368533 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 ANAPC16Q96DE5 110 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 CSPG4Q6UVK1 2322 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 PPBPP02775 128 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 NTF3P20783 257 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 TSPOP30536 169 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 IER3P46695 156 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 OR4B1Q8NGF8 309 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 OR10X1Q8NGY0 326 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 RCHY1Q96PM5 261 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 MRPL18Q9H0U6 180 aaKnown RBP8.63□□□□□ -1.03
TPM3-212ENST00000368533 LINC00312Q9Y6C7 94 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 NAV3Q8IVL0 2385 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 TET2Q6N021 2002 aaPredicted RBP8.63□□□□□ -1.03
TPM3-212ENST00000368533 A0A1W2PN81 502 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 C11orf71Q6IPW1 123 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 PNKDQ8N490 385 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 SEPSECSQ9HD40 501 aaKnown RBP8.63□□□□□ -1.03
TPM3-212ENST00000368533 NRN1Q9NPD7 142 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 BET1LQ9NYM9 111 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 RPUSD1Q9UJJ7 312 aaKnown RBP8.63□□□□□ -1.03
TPM3-212ENST00000368533 TCF19Q9Y242 345 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 WDR83OSQ9Y284 106 aa8.63□□□□□ -1.03
TPM3-212ENST00000368533 NAV2Q8IVL1 2488 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 OR2T8A6NH00 312 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 C22orf46C9J442 243 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 ACTL6BO94805 426 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 ARL14EPLP0DKL9 152 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 CD24P25063 80 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 KLRD1Q13241 179 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 PIP4P2Q8N4L2 257 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 MRPL20Q9BYC9 149 aaKnown RBP8.62□□□□□ -1.03
TPM3-212ENST00000368533 FCN1O00602 326 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 CIDEAO60543 219 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 APELAP0DMC3 54 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 PAFAH1B2P68402 229 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 OR4A47Q6IF82 309 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 MEGF9Q9H1U4 602 aa8.62□□□□□ -1.03
TPM3-212ENST00000368533 PPIAL4CA0A0B4J2A2 164 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 PPIAL4GP0DN37 164 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 LCN2P80188 198 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 TREML4Q6UXN2 200 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 TMEM144Q7Z5S9 345 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 OR4S2Q8NH73 311 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 GNB4Q9HAV0 340 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 CHTOPQ9Y3Y2 248 aaKnown RBP8.61□□□□□ -1.03
TPM3-212ENST00000368533 TNFRSF13BO14836 293 aaPredicted RBP8.61□□□□□ -1.03
TPM3-212ENST00000368533 ENSAO43768 121 aaKnown RBP8.61□□□□□ -1.03
TPM3-212ENST00000368533 ZNF90Q03938 601 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 HIST2H2BCQ6DN03 193 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 ZNF586Q9NXT0 402 aa8.61□□□□□ -1.03
TPM3-212ENST00000368533 FASNP49327 2511 aaKnown RBP8.61□□□□□ -1.03
TPM3-212ENST00000368533 GPX1P07203 203 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 PPOXP50336 477 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 GNB1P62873 340 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 ASPHD1Q5U4P2 390 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 AMMECR1LQ6DCA0 310 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 ZNF841Q6ZN19 808 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 BPESC1Q9GZL8 116 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 ZNF430Q9H8G1 570 aaPredicted RBP8.6□□□□□ -1.03
TPM3-212ENST00000368533 TRBV20OR9-2A0A075B6H5 130 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 SNURFLB1AK76 121 aa8.6□□□□□ -1.03
TPM3-212ENST00000368533 C3orf79P0CE67 100 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms