RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CHEK1O14757 476 aa16.83■□□□□ 0.28
ECHDC1-203ENST00000368291 FRMD6-AS1P0C7T7 363 aa16.83■□□□□ 0.28
ECHDC1-203ENST00000368291 NKX2-1P43699 371 aaPredicted RBP16.83■□□□□ 0.28
ECHDC1-203ENST00000368291 C19orf73Q9NVV2 129 aa16.83■□□□□ 0.28
ECHDC1-203ENST00000368291 IGHV3-49A0A0A0MS15 119 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 TRAV14DV4A0A0A6YYC5 116 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 PRSS46E5RG02 174 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 CD81P60033 236 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 IAH1Q2TAA2 248 aaPredicted RBP16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 NRARPQ7Z6K4 114 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 ZBTB8BQ8NAP8 495 aaPredicted RBP16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 OR1S2Q8NGQ3 325 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 ENKURQ8TC29 256 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 ACY3Q96HD9 319 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 ASCL2Q99929 193 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 NEURL2Q9BR09 285 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 RHPN1-AS1Q9BWJ2 59 aa16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 HUWE1Q7Z6Z7 4374 aaKnown RBP16.82■□□□□ 0.28
ECHDC1-203ENST00000368291 IL5P05113 134 aa16.81■□□□□ 0.28
ECHDC1-203ENST00000368291 OR10J1P30954 320 aa16.81■□□□□ 0.28
ECHDC1-203ENST00000368291 GPX4P36969 197 aaPredicted RBP16.81■□□□□ 0.28
ECHDC1-203ENST00000368291 GAMTQ14353 236 aa16.81■□□□□ 0.28
ECHDC1-203ENST00000368291 SBSPONQ8IVN8 264 aa16.81■□□□□ 0.28
ECHDC1-203ENST00000368291 C12orf45Q8N5I9 185 aaPredicted RBP16.81■□□□□ 0.28
ECHDC1-203ENST00000368291 IGHV3OR16-13A0A075B7E8 117 aa16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 IGHV3-74A0A0B4J1X5 117 aa16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 TSPAN4O14817 238 aa16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 APOHP02749 345 aaPredicted RBP16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 YPEL3P61236 119 aaPredicted RBP16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 RAB11AP62491 216 aa16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 RBPMS2Q6ZRY4 209 aaKnown RBP16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 RNF2Q99496 336 aa16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 GINS3Q9BRX5 216 aa16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 WFDC10AQ9H1F0 79 aa16.8■□□□□ 0.28
ECHDC1-203ENST00000368291 H3BP45 60 aa16.79■□□□□ 0.28
ECHDC1-203ENST00000368291 PAX9P55771 341 aa16.79■□□□□ 0.28
ECHDC1-203ENST00000368291 SPANXN5Q5MJ07 72 aa16.79■□□□□ 0.28
ECHDC1-203ENST00000368291 LILRB2Q8N423 598 aa16.79■□□□□ 0.28
ECHDC1-203ENST00000368291 VSIRQ9H7M9 311 aa16.79■□□□□ 0.28
ECHDC1-203ENST00000368291 PAIP2BQ9ULR5 123 aaKnown RBP16.79■□□□□ 0.28
ECHDC1-203ENST00000368291 IGKV1D-37A0A075B6S9 117 aa16.78■□□□□ 0.28
ECHDC1-203ENST00000368291 SSSCA1O60232 199 aa16.78■□□□□ 0.28
ECHDC1-203ENST00000368291 SCGB2A1O75556 95 aa16.78■□□□□ 0.28
ECHDC1-203ENST00000368291 RPP30P78346 268 aaKnown RBP16.78■□□□□ 0.28
ECHDC1-203ENST00000368291 FAM90A2PQ658T7 463 aa16.78■□□□□ 0.28
ECHDC1-203ENST00000368291 ST8SIA2Q92186 375 aa16.78■□□□□ 0.28
ECHDC1-203ENST00000368291 GSKIPQ9P0R6 139 aa16.78■□□□□ 0.28
ECHDC1-203ENST00000368291 RCL1Q9Y2P8 373 aaKnown RBP16.78■□□□□ 0.28
ECHDC1-203ENST00000368291 SCGB1D2O95969 90 aa16.77■□□□□ 0.28
ECHDC1-203ENST00000368291 MBPP02686 304 aaPredicted RBP16.77■□□□□ 0.28
ECHDC1-203ENST00000368291 DEFB125Q8N687 156 aa16.77■□□□□ 0.28
ECHDC1-203ENST00000368291 SMIM8Q96KF7 97 aa16.77■□□□□ 0.28
ECHDC1-203ENST00000368291 SPAG8Q99932 426 aaPredicted RBP16.77■□□□□ 0.28
ECHDC1-203ENST00000368291 STRAPQ9Y3F4 350 aaKnown RBP16.77■□□□□ 0.28
ECHDC1-203ENST00000368291 PMS2P5A8MQ11 134 aa16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 TOMM40O96008 361 aa16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 NHLRC4P0CG21 123 aaPredicted RBP16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 CRYBB3P26998 211 aa16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 LAMTOR1Q6IAA8 161 aa16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 Q8WTZ3 238 aa16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 SLC35E1Q96K37 410 aa16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 MARVELD1Q9BSK0 173 aa16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 PSENENQ9NZ42 101 aa16.77■□□□□ 0.27
ECHDC1-203ENST00000368291 IGKV1OR2-108A0A075B7D4 117 aa16.76■□□□□ 0.27
ECHDC1-203ENST00000368291 IGHV3-66A0A0C4DH42 116 aa16.76■□□□□ 0.27
ECHDC1-203ENST00000368291 OR11H12B2RN74 326 aa16.76■□□□□ 0.27
ECHDC1-203ENST00000368291 NPPCP23582 126 aa16.76■□□□□ 0.27
ECHDC1-203ENST00000368291 LINC00322Q6ZN03 302 aaPredicted RBP16.76■□□□□ 0.27
ECHDC1-203ENST00000368291 FAM25EA8MYX2 175 aa16.75■□□□□ 0.27
ECHDC1-203ENST00000368291 PSG1P11464 419 aa16.75■□□□□ 0.27
ECHDC1-203ENST00000368291 DEFA1P59665 94 aa16.75■□□□□ 0.27
ECHDC1-203ENST00000368291 DEFA3P59666 94 aa16.75■□□□□ 0.27
ECHDC1-203ENST00000368291 U3KQE9 123 aa16.75■□□□□ 0.27
ECHDC1-203ENST00000368291 C5orf51A6NDU8 294 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 INMT-MINDY4F8WBC2 141 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 CCNKO75909 580 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 RD3LP0DJH9 198 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 ZNF90Q03938 601 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 IL15RAQ13261 267 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 USF2Q15853 346 aaPredicted RBP16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 TMEM14EPQ6UXP3 125 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 TCF24Q7RTU0 167 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 C2orf50Q96LR7 162 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 METTL26Q96S19 204 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 RAB40CQ96S21 281 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 TUBA4BQ9H853 241 aa16.74■□□□□ 0.27
ECHDC1-203ENST00000368291 C7orf66A4D0T2 115 aa16.73■□□□□ 0.27
ECHDC1-203ENST00000368291 ZFP92A6NM28 416 aa16.73■□□□□ 0.27
ECHDC1-203ENST00000368291 IL4P05112 153 aa16.73■□□□□ 0.27
ECHDC1-203ENST00000368291 TAS2R30P59541 319 aa16.73■□□□□ 0.27
ECHDC1-203ENST00000368291 THAP8Q8NA92 274 aa16.73■□□□□ 0.27
ECHDC1-203ENST00000368291 C11orf1Q9H5F2 150 aa16.73■□□□□ 0.27
ECHDC1-203ENST00000368291 RBMY1BA6NDE4 496 aaKnown RBP16.72■□□□□ 0.27
ECHDC1-203ENST00000368291 RBMY1EA6NEQ0 496 aaKnown RBP16.72■□□□□ 0.27
ECHDC1-203ENST00000368291 SNRPGP15A8MWD9 76 aa16.72■□□□□ 0.27
ECHDC1-203ENST00000368291 K7EPK0 472 aa16.72■□□□□ 0.27
ECHDC1-203ENST00000368291 DFFBO76075 338 aa16.72■□□□□ 0.27
ECHDC1-203ENST00000368291 RBMY1DP0C7P1 496 aaKnown RBP16.72■□□□□ 0.27
ECHDC1-203ENST00000368291 ACOT7LQ6ZUV0 252 aa16.72■□□□□ 0.27
ECHDC1-203ENST00000368291 CITED4Q96RK1 184 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms