RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 AKR1C1Q04828 323 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 ECSCRQ19T08 205 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 GCSAMLQ5JQS6 135 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 C9orf152Q5JTZ5 239 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 SSX7Q7RTT5 188 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 RPP25LQ8N5L8 163 aaKnown RBP7.41□□□□□ -1.22
VTA1-201ENST00000367621 TMEM86BQ8N661 226 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 OR4X1Q8NH49 305 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 LRRC20Q8TCA0 184 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 ACY3Q96HD9 319 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 ZNF414Q96IQ9 312 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 SLC35E1Q96K37 410 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 NOL4LQ96MY1 436 aaPredicted RBP7.41□□□□□ -1.22
VTA1-201ENST00000367621 ZNF702PQ9H963 129 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 ESM1Q9NQ30 184 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 MED9Q9NWA0 146 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 LINC00527Q9UJ94 153 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 ZNF580Q9UK33 172 aa7.41□□□□□ -1.22
VTA1-201ENST00000367621 SONP18583 2426 aaKnown RBP7.41□□□□□ -1.22
VTA1-201ENST00000367621 MFSD2BA6NFX1 497 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 TEX46H3BTG2 121 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 CORTO00230 105 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 BRI3O95415 125 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 GATA2P23769 480 aaPredicted RBP7.4□□□□□ -1.22
VTA1-201ENST00000367621 ELLP55199 621 aaPredicted RBP7.4□□□□□ -1.22
VTA1-201ENST00000367621 RAB2AP61019 212 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 DEFA5Q01523 94 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 TMEM41BQ5BJD5 291 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 FFAR4Q5NUL3 377 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 PXDC1Q5TGL8 231 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 ETFRF1Q6IPR1 90 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 SPSB3Q6PJ21 355 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 Q6ZRG5 221 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 SLC35E3Q7Z769 313 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 RCC1LQ96I51 464 aaKnown RBP7.4□□□□□ -1.22
VTA1-201ENST00000367621 PXMP4Q9Y6I8 212 aa7.4□□□□□ -1.22
VTA1-201ENST00000367621 HIVEP1P15822 2718 aa7.4□□□□□ -1.23
VTA1-201ENST00000367621 PSMB11A5LHX3 300 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 BTBD17A6NE02 478 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 C17orf112F2Z3M2 114 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 EIF3GO75821 320 aaKnown RBP eCLIP7.39□□□□□ -1.23
VTA1-201ENST00000367621 OR2J3O76001 311 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 IGKV1-17P01599 117 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 IGLC1P0CG04 106 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 FCGR2BP31994 310 aaPredicted RBP7.39□□□□□ -1.23
VTA1-201ENST00000367621 BLOC1S1P78537 153 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 CCL20P78556 96 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 ZNF90Q03938 601 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 NDUFA5Q16718 116 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 TMEM95Q3KNT9 176 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 AKR1C8PQ5T2L2 129 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 DPPA3Q6W0C5 159 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 CYP2G1PQ6ZSU1 146 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 Q8N2B8 174 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 STPG3Q8N7X2 389 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 ZNF709Q8N972 641 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 BPIFCQ8NFQ6 507 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 FAM213BQ8TBF2 198 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 MBD3L1Q8WWY6 194 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 CCDC140Q96MF4 163 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 DUX5Q96PT3 197 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 TRGV9Q99603 122 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 SCRT1Q9BWW7 348 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 SLC39A9Q9NUM3 307 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 FBXL7Q9UJT9 491 aa7.39□□□□□ -1.23
VTA1-201ENST00000367621 TRAV1-1A0A0B4J248 108 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 TCRBV4S1A1TA0A5B7 111 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 DNAJC9-AS1A6NH13 148 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 SEC14L6B5MCN3 397 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 AP4M1O00189 453 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 CLN5O75503 358 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 TSPAN9O75954 239 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 TSPAN15O95858 294 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 CD99P14209 185 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 HIST1H1BP16401 226 aaKnown RBP7.38□□□□□ -1.23
VTA1-201ENST00000367621 M6PRP20645 277 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 HNF1AP20823 631 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 B2MP61769 119 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 RHOGP84095 191 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 RAB31Q13636 194 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 COMMD7Q86VX2 200 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 NECAP1Q8NC96 275 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 ZNF502Q8TBZ5 544 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 VN1R17PQ8TDU5 208 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 KLK15Q9H2R5 256 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 S4R3C0 116 aa7.38□□□□□ -1.23
VTA1-201ENST00000367621 CLDN34H7C241 214 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 MBP02144 154 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 KIAA0141Q14154 515 aaPredicted RBP7.37□□□□□ -1.23
VTA1-201ENST00000367621 ACOT6Q3I5F7 207 aaPredicted RBP7.37□□□□□ -1.23
VTA1-201ENST00000367621 TIGITQ495A1 244 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 SPATA31B1PQ5VZV4 182 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 PATE2Q6UY27 113 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 OR10G4Q8NGN3 311 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 OR10G9Q8NGN4 311 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 OR10G7Q8NGN6 311 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 TMEM37Q8WXS4 190 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 MS4A10Q96PG2 267 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 PRSS22Q9GZN4 317 aa7.37□□□□□ -1.23
VTA1-201ENST00000367621 HRH4Q9H3N8 390 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms