RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 Q8NFD4 153 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 NPFFR1Q9GZQ6 430 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 NDUFS6O75380 124 aaKnown RBP8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 DTX2Q86UW9 622 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 ZNF257Q9Y2Q1 563 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 SLC25A15Q9Y619 301 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 CD55P08174 381 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 DMRTA1Q5VZB9 504 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 SLC25A20O43772 301 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 CGAP01215 116 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 IGKV1D-33P01593 117 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 IGKV1-33P01594 117 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 DSCR9P59020 149 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 RNASE6Q93091 150 aaKnown RBP8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 KLK15Q9H2R5 256 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 CBLN4Q9NTU7 201 aa8.06□□□□□ -1.12
CACNA1S-202ENST00000367338 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 IGKV1-6A0A0C4DH72 117 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 NBR2O15453 112 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 LMO1P25800 156 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 C20orf204Q6ZNR8 217 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 MRPL20Q9BYC9 149 aaKnown RBP8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 DOCK9Q9BZ29 2069 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 FABP5P3A8MUU1 101 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BKO60814 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BJP06899 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BOP23527 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BBP33778 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BDP58876 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BCP62807 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 BSPH1Q075Z2 132 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST2H2BEQ16778 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 Q5PR19 223 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BHQ93079 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 DMRTA2Q96SC8 542 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BNQ99877 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 HIST1H2BMQ99879 126 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 FOXC2Q99958 501 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 MBD3L4A6NDZ8 208 aaPredicted RBP8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 MBD3L3A6NE82 208 aaPredicted RBP8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 MBD3L5A6NJ08 208 aaPredicted RBP8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 ITGB1BP1O14713 200 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 SAA1P0DJI8 122 aaPredicted RBP8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 FOXF2Q12947 444 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 CD177Q8N6Q3 437 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 MBD3L2Q8NHZ7 208 aaPredicted RBP8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 Q9H3A6 140 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 FBXL15Q9H469 300 aa8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 NXT2Q9NPJ8 142 aaKnown RBP8.05□□□□□ -1.12
CACNA1S-202ENST00000367338 CBLN1P23435 193 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 OR10J3Q5JRS4 329 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 FAM201AQ5SY85 155 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 SPSB3Q6PJ21 355 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 LURAP1LQ8IV03 231 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 LIME1Q9H400 295 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 TMEM131Q92545 1883 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 C9JCJ5 164 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 EGR1P18146 543 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 GPR183P32249 361 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 ORMDL2Q53FV1 153 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 KIR3DL3Q8N743 410 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 PRSS22Q9GZN4 317 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 ST20Q9HBF5 79 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 OSTCQ9NRP0 149 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 KIAA1644Q3SXP7 199 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 C3orf36Q3SXR2 165 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 TREML4Q6UXN2 200 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 MIR17HGQ75NE6 70 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 DTX1Q86Y01 620 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 COQ2Q96H96 371 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 ALPK2Q86TB3 2170 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 TRAV21A0A0B4J279 112 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 IGKV3OR2-268A0A0C4DH90 116 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 A0A0G2JRQ6 117 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 A0A1W2PRE2 83 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 M0R381 172 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 SNRPCP09234 159 aaKnown RBP8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 C5orf30Q96GV9 206 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 TBL2Q9Y4P3 447 aaKnown RBP8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 TRAV8-6A0A0B4J262 113 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 GRIFINA4D1Z8 144 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 OVOL1O14753 267 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 IGHV1-46P01743 117 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 IFI27P40305 119 aaPredicted RBP8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 LINC01587Q99440 93 aa8.04□□□□□ -1.12
CACNA1S-202ENST00000367338 SRSF1Q07955 248 aaKnown RBP eCLIP8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 FNDC10F2Z333 226 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 CXCL1P09341 107 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 ZNF585BQ52M93 769 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 ATP5L2Q7Z4Y8 100 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 TMEM167AQ8TBQ9 72 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 SMPXQ9UHP9 88 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 F2Z2F3 143 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 MLNRO43193 412 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 VDAC2P45880 294 aaPredicted RBP8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 RPP25LQ8N5L8 163 aaKnown RBP8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 LYPD6BQ8NI32 183 aa8.03□□□□□ -1.12
CACNA1S-202ENST00000367338 TRBV7-9A0A0J9YWB2 115 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms