RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 FOXL2NBQ6ZUU3 175 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 RTTNQ86VV8 2226 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 IFI27P40305 119 aaPredicted RBP3.13□□□□□ -1.91
SYNE1-207ENST00000367255 PSMB2P49721 201 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 COL14A1Q05707 1796 aaKnown RBP3.13□□□□□ -1.91
SYNE1-207ENST00000367255 NCOR2Q9Y618 2525 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 ADAMTSL5Q6ZMM2 481 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF319Q9P2F9 582 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 FAM90A2PQ658T7 463 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 PCSK4Q6UW60 755 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 VKORC1Q9BQB6 163 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 ZNF785A8K8V0 405 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 H3BTX0 84 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 WFDC12Q8WWY7 111 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 IGKV3D-11A0A0A0MRZ8 115 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 A0A087WV48 116 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 ADAMTS7Q9UKP4 1686 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 CENPVL3A0A0U1RRI6 287 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 A0A087X0K7 114 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 VPREB1P12018 145 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 GEMIN7Q9H840 131 aaKnown RBP3.13□□□□□ -1.91
SYNE1-207ENST00000367255 RNF7Q9UBF6 113 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 A0A1W2PQU0 124 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 NDUFB3O43676 98 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 FAM106AQ4KMX7 169 aa3.13□□□□□ -1.91
SYNE1-207ENST00000367255 RGPD2P0DJD1 1756 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 CRISPLD2Q9H0B8 497 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 FBXL7Q9UJT9 491 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 H7C423 109 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 H7C2G1 150 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 K7EN84 100 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 C1QL2Q7Z5L3 287 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 LY6G5BQ8NDX9 201 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 RRN3P1Q2M238 152 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 PATE1Q8WXA2 126 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 ANKRD36CQ5JPF3 1778 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 B9A039 149 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 NPC2P61916 151 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 A0A0J9YX75 114 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 TAX1BP3O14907 124 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 NUP188Q5SRE5 1749 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 IGHV1-45A0A0A0MS14 117 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 A0A1W2PP55 124 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 HOXA3O43365 443 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-207ENST00000367255 FOXQ1Q9C009 403 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 CSN3P07498 182 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 RTP5Q14D33 572 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 MBNL2Q5VZF2 373 aaKnown RBP3.12□□□□□ -1.91
SYNE1-207ENST00000367255 SPINK8P0C7L1 97 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 DUSP14O95147 198 aaKnown RBP3.12□□□□□ -1.91
SYNE1-207ENST00000367255 LEPROTO15243 131 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 NPYP01303 97 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 FAM214BQ7L5A3 538 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 PNRC2Q9NPJ4 139 aaKnown RBP3.12□□□□□ -1.91
SYNE1-207ENST00000367255 TTC3P53804 2025 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 GAGE12HA6NDE8 117 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 TIMP1P01033 207 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 RNF126Q9BV68 326 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 UNC13CQ8NB66 2214 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 GFERP55789 205 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 RASL10BQ96S79 203 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 UFC1Q9Y3C8 167 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 PCNX1Q96RV3 2341 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 TMEM256Q8N2U0 113 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 AKAP6Q13023 2319 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 LINC01590Q5TEZ4 76 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 RAXQ9Y2V3 346 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 TIMM8AO60220 97 aaPredicted RBP3.12□□□□□ -1.91
SYNE1-207ENST00000367255 ARL14EPLP0DKL9 152 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 A0A096LPE4 126 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 A0A1W2PPZ6 126 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 NKX2-8O15522 239 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 LINC00477Q96M19 166 aa3.12□□□□□ -1.91
SYNE1-207ENST00000367255 TRAV21A0A0B4J279 112 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 F2RL2O00254 374 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 STPG4Q8N801 248 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 MYLKQ15746 1914 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 TPTE2P1Q5T6R2 138 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 TRBV7-1A0A0A6YYK4 115 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 SPRY1O43609 319 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-207ENST00000367255 MRGPRG-AS1Q2M3A8 158 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 SHROOM3Q8TF72 1996 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 SOCS3O14543 225 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 CTGFP29279 349 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 SPANXN1Q5VSR9 72 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 A0A1W2PPM0 123 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 PRR33A8MZF0 331 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 MAFAQ8NHW3 353 aaPredicted RBP3.11□□□□□ -1.91
SYNE1-207ENST00000367255 TRAV3A0A0B4J244 114 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 C9orf50Q5SZB4 431 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 CRPP02741 224 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 WFDC5Q8TCV5 224 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 CRIM1Q9NZV1 1036 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 ERG28Q9UKR5 140 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 ICE1Q9Y2F5 2266 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 FHL5Q5TD97 284 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 C8orf44Q96CB5 159 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 ASXL3Q9C0F0 2248 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 IGHV1-69P01742 117 aa3.11□□□□□ -1.91
SYNE1-207ENST00000367255 IGHG2P01859 326 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms