RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 CST9LQ9H4G1 147 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 GGTLC3B5MD39 225 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 CRYGSP22914 178 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 EFNB3Q15768 340 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 C9orf139Q6ZV77 190 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 IGHV1-3A0A0C4DH29 117 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 LINC00527Q9UJ94 153 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 WDR83OSQ9Y284 106 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 JPT2Q9H910 190 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 SRD5A1P18405 259 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 GFI1BQ5VTD9 330 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 TMEM200BQ69YZ2 307 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 ASCL4Q6XD76 172 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 ATP5L2Q7Z4Y8 100 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 FAM19A2Q8N3H0 131 aa16.78■□□□□ 0.28
SMURF1-202ENST00000361368 H3BUX3 64 aa16.77■□□□□ 0.28
SMURF1-202ENST00000361368 ID3Q02535 119 aa16.77■□□□□ 0.27
SMURF1-202ENST00000361368 SMPXQ9UHP9 88 aa16.77■□□□□ 0.27
SMURF1-202ENST00000361368 RNF222A6NCQ9 220 aa16.77■□□□□ 0.27
SMURF1-202ENST00000361368 PRR32B1ATL7 298 aa16.77■□□□□ 0.27
SMURF1-202ENST00000361368 LINC01356Q8N9X3 169 aa16.77■□□□□ 0.27
SMURF1-202ENST00000361368 TSKUQ8WUA8 353 aa16.77■□□□□ 0.27
SMURF1-202ENST00000361368 A0A1B0GWJ7 208 aa16.76■□□□□ 0.27
SMURF1-202ENST00000361368 TRAV2A0A0B4J234 112 aa16.76■□□□□ 0.27
SMURF1-202ENST00000361368 ST6GALNAC6Q969X2 333 aa16.76■□□□□ 0.27
SMURF1-202ENST00000361368 CHCHD1Q96BP2 118 aaKnown RBP16.76■□□□□ 0.27
SMURF1-202ENST00000361368 TDRD6O60522 2096 aaKnown RBP16.76■□□□□ 0.27
SMURF1-202ENST00000361368 MPZP25189 248 aa16.76■□□□□ 0.27
SMURF1-202ENST00000361368 SEC11AP67812 179 aa16.76■□□□□ 0.27
SMURF1-202ENST00000361368 NIT1Q86X76 327 aa16.76■□□□□ 0.27
SMURF1-202ENST00000361368 NRN1Q9NPD7 142 aa16.76■□□□□ 0.27
SMURF1-202ENST00000361368 ARFGEF1Q9Y6D6 1849 aa16.76■□□□□ 0.27
SMURF1-202ENST00000361368 TMEM8BA6NDV4 472 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 IGKCP01834 107 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 TMEM219Q86XT9 240 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 ANKRD31Q8N7Z5 1873 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 MLNRO43193 412 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 TFF1P04155 84 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 TRAV12-3A0A0B4J271 114 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 PPIFP30405 207 aaKnown RBP16.75■□□□□ 0.27
SMURF1-202ENST00000361368 C3orf56Q8N813 242 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 FAM223BA6NKX1 122 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 FAM223AQ8IWN6 122 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 TMEM170AQ8WVE7 144 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 SSBP4Q9BWG4 385 aaPredicted RBP16.75■□□□□ 0.27
SMURF1-202ENST00000361368 AHCTF1Q8WYP5 2266 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 GGNQ86UU5 652 aa16.75■□□□□ 0.27
SMURF1-202ENST00000361368 PIP4P2Q8N4L2 257 aa16.74■□□□□ 0.27
SMURF1-202ENST00000361368 LDLRAD4O15165 306 aa16.74■□□□□ 0.27
SMURF1-202ENST00000361368 IGHV4-39P01824 125 aa16.74■□□□□ 0.27
SMURF1-202ENST00000361368 TRGV1A0A0A0MS02 117 aa16.74■□□□□ 0.27
SMURF1-202ENST00000361368 INSP01308 110 aa16.74■□□□□ 0.27
SMURF1-202ENST00000361368 LINC00477Q96M19 166 aa16.74■□□□□ 0.27
SMURF1-202ENST00000361368 GNB1LQ9BYB4 327 aa16.74■□□□□ 0.27
SMURF1-202ENST00000361368 HOXA3O43365 443 aaPredicted RBP16.74■□□□□ 0.27
SMURF1-202ENST00000361368 SERF1AO75920 110 aa16.74■□□□□ 0.27
SMURF1-202ENST00000361368 LAGE3Q14657 143 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 LINC00518Q8N0U6 118 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 TRGV9Q99603 122 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 TRAV8-2A0A0B4J237 113 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 A0A1B0GV72 72 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 NDUFS8O00217 210 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 NAPSAO96009 420 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 CD55P08174 381 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 C1QTNF9P0C862 333 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 SCN10AQ9Y5Y9 1956 aa16.73■□□□□ 0.27
SMURF1-202ENST00000361368 SLC25A48Q6ZT89 311 aaKnown RBP16.73■□□□□ 0.27
SMURF1-202ENST00000361368 A0A1B0GV90 55 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 C5orf64Q2M2E5 130 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 OR10W1Q8NGF6 305 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 WFDC12Q8WWY7 111 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 FGFBP3Q8TAT2 258 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 TMEM238C9JI98 176 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 F8WEM9 126 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 ZNF138P52744 262 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 RASL10AQ92737 203 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 ZNF318Q5VUA4 2279 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 NPIPB5A8MRT5 1133 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 KLHL30-AS1Q8NEE0 82 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 A0A0G2JNJ9 132 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 EVI2AP22794 236 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 ADMP35318 185 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 IFITM2Q01629 132 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 Q9UFV3 132 aa16.72■□□□□ 0.27
SMURF1-202ENST00000361368 LYPD3O95274 346 aa16.71■□□□□ 0.27
SMURF1-202ENST00000361368 CA1P00915 261 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 KLRD1Q13241 179 aa16.71■□□□□ 0.27
SMURF1-202ENST00000361368 ATXN8Q156A1 80 aa16.71■□□□□ 0.27
SMURF1-202ENST00000361368 RNF126Q9BV68 326 aa16.71■□□□□ 0.27
SMURF1-202ENST00000361368 SLC25A39Q9BZJ4 359 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 NHP2Q9NX24 153 aaKnown RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 MBD3L4A6NDZ8 208 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 MBD3L3A6NE82 208 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 MBD3L5A6NJ08 208 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 TBX6O95947 436 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 PSG1P11464 419 aa16.71■□□□□ 0.27
SMURF1-202ENST00000361368 RPL35AP18077 110 aaKnown RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 SRSF6Q13247 344 aaKnown RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 MBD3L2Q8NHZ7 208 aaPredicted RBP16.71■□□□□ 0.27
SMURF1-202ENST00000361368 PARP14Q460N5 1801 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms