RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 KIR2DL4Q99706 377 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 PSG8Q9UQ74 426 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 KIF26BQ2KJY2 2108 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 IGKV1-6A0A0C4DH72 117 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 LINC00473A8K010 186 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 IGHV3-23P01764 117 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 IGLC2P0DOY2 106 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 IGLC3P0DOY3 106 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 YPEL3P61236 119 aaPredicted RBP11.53□□□□□ -0.56
SMC5-201ENST00000361138 OR10W1Q8NGF6 305 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 PRR7Q8TB68 274 aa11.53□□□□□ -0.56
SMC5-201ENST00000361138 TSPAN13O95857 204 aa11.52□□□□□ -0.56
SMC5-201ENST00000361138 TEX43Q6ZNM6 134 aa11.52□□□□□ -0.56
SMC5-201ENST00000361138 SLC25A2Q9BXI2 301 aa11.52□□□□□ -0.56
SMC5-201ENST00000361138 FBXL15Q9H469 300 aa11.52□□□□□ -0.56
SMC5-201ENST00000361138 IGKV3D-15A0A087WSY6 115 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 PINLYPA6NC86 204 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 NDUFS8O00217 210 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 TMEM170BQ5T4T1 132 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 C8orf46Q8TAG6 207 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 PSPNO60542 156 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 TGFAP01135 160 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 PRSS2P07478 247 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 GAGE13Q4V321 117 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 ANAPC13Q9BS18 74 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 TET1Q8NFU7 2136 aa11.52□□□□□ -0.57
SMC5-201ENST00000361138 SLC25A48Q6ZT89 311 aaKnown RBP11.52□□□□□ -0.57
SMC5-201ENST00000361138 CRXO43186 299 aaPredicted RBP11.51□□□□□ -0.57
SMC5-201ENST00000361138 SS18L1O75177 396 aaPredicted RBP11.51□□□□□ -0.57
SMC5-201ENST00000361138 ATP1A1-AS1Q5TC04 95 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 S4R3C0 116 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 KIR3DS1Q14943 382 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 FREM3P0C091 2139 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 ZNF524Q96C55 264 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 NXT2Q9NPJ8 142 aaKnown RBP11.51□□□□□ -0.57
SMC5-201ENST00000361138 UNQ6494/PRO21346Q6UXR6 183 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 SCN5AQ14524 2016 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 NKX2-8O15522 239 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 GFRA3O60609 400 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 PRSS8Q16651 343 aa11.51□□□□□ -0.57
SMC5-201ENST00000361138 WISP1O95388 367 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 LHFPL4Q7Z7J7 247 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 ZNF329Q86UD4 541 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
SMC5-201ENST00000361138 PLXND1Q9Y4D7 1925 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 SPAARA0A1B0GVQ0 90 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 PAX2Q02962 417 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 ZNF71Q9NQZ8 489 aaPredicted RBP11.5□□□□□ -0.57
SMC5-201ENST00000361138 RPRMLQ8N4K4 120 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 FOXG1P55316 489 aaPredicted RBP11.5□□□□□ -0.57
SMC5-201ENST00000361138 C18orf32Q8TCD1 76 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 PLA2G2EQ9NZK7 142 aa11.5□□□□□ -0.57
SMC5-201ENST00000361138 D6R8Y8 96 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 PPBPP02775 128 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 MAJINQ3KP22 176 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 ITGB1BP1O14713 200 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 PPP1R17O96001 155 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 CKS1BP61024 79 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 BCL6BQ8N143 479 aaPredicted RBP11.49□□□□□ -0.57
SMC5-201ENST00000361138 TEX29Q8N6K0 151 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 EEF1AKMT3Q96AZ1 226 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 CNTRLQ7Z7A1 2325 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 NPPCP23582 126 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 ATP5G2Q06055 141 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 SRSF1Q07955 248 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMC5-201ENST00000361138 C10orf126Q8N4M7 172 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 HS3ST6Q96QI5 342 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 HEATR5BQ9P2D3 2071 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 MMP23AO75900 390 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 EVI2AP22794 236 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 ASIPP42127 132 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 PVRIGQ6DKI7 326 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 COPS9Q8WXC6 57 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 SMPXQ9UHP9 88 aa11.49□□□□□ -0.57
SMC5-201ENST00000361138 M0R381 172 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 CYYR1Q96J86 154 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 SELENOKQ9Y6D0 94 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 TRAV8-2A0A0B4J237 113 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 SP9P0CG40 484 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 LINC00205P59089 165 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 IGHV3-66A0A0C4DH42 116 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
SMC5-201ENST00000361138 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 FNDC10F2Z333 226 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 LTBRP36941 435 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 CIRBPQ14011 172 aaKnown RBP11.48□□□□□ -0.57
SMC5-201ENST00000361138 ZNF56Q15929 161 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 C17orf82Q86X59 251 aaPredicted RBP11.48□□□□□ -0.57
SMC5-201ENST00000361138 KIR2DL5AQ8N109 375 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 GTSF1LQ9H1H1 148 aa11.48□□□□□ -0.57
SMC5-201ENST00000361138 FABP5P3A8MUU1 101 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 TCRAP04437 139 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 GTSCR1Q86UQ5 136 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 CD177Q8N6Q3 437 aa11.47□□□□□ -0.57
SMC5-201ENST00000361138 V9GYV3 84 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms